Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:70575572-70655591

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79 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mink1 11 70562881 to 70614483 51602 + protein coding gene misshapen-like kinase 1 (zebrafish)
Tssr108979 11 70587157 to 70587160 3 - TSS region transcription start site region 108979
Tssr102747 11 70606656 to 70606670 14 + TSS region transcription start site region 102747
Tssr102748 11 70607101 to 70607113 12 + TSS region transcription start site region 102748
Gm12316 11 70611212 to 70613211 1999 - antisense lncRNA gene predicted gene 12316
Chrne 11 70614883 to 70619216 4333 - protein coding gene cholinergic receptor, nicotinic, epsilon polypeptide
Cpgi3191 11 70615120 to 70615901 781 CpG island CpG island 3191
Tssr108980 11 70615545 to 70615559 14 - TSS region transcription start site region 108980
Tssr108981 11 70615572 to 70615591 19 - TSS region transcription start site region 108981
Tssr108982 11 70615645 to 70615656 11 - TSS region transcription start site region 108982
Tssr108983 11 70615657 to 70615670 13 - TSS region transcription start site region 108983
Tssr108984 11 70615672 to 70615690 18 - TSS region transcription start site region 108984
Tssr108985 11 70615692 to 70615718 26 - TSS region transcription start site region 108985
Tssr102749 11 70615836 to 70615841 5 + TSS region transcription start site region 102749
4930544D05Rik 11 70615848 to 70616890 1042 + protein coding gene RIKEN cDNA 4930544D05 gene
Tssr102750 11 70615862 to 70615876 14 + TSS region transcription start site region 102750
Tssr102751 11 70615888 to 70615900 12 + TSS region transcription start site region 102751
Cpgi3192 11 70616339 to 70616699 360 CpG island CpG island 3192
Tssr108986 11 70619195 to 70619207 12 - TSS region transcription start site region 108986
D11Mit210 11 70619874 to 70620003 129 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 210
Gm12315 11 70623027 to 70625561 2534 - lincRNA gene predicted gene 12315
Tssr102752 11 70639118 to 70639175 57 + TSS region transcription start site region 102752
Gp1ba 11 70639122 to 70642036 2914 + protein coding gene glycoprotein 1b, alpha polypeptide
Tssr102753 11 70640219 to 70640246 27 + TSS region transcription start site region 102753
Tssr102754 11 70640361 to 70640372 11 + TSS region transcription start site region 102754
Slc25a11 11 70644196 to 70647479 3283 - protein coding gene solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11
Cpgi3193 11 70646569 to 70648125 1556 CpG island CpG island 3193
Tssr108987 11 70646864 to 70646888 24 - TSS region transcription start site region 108987
Tssr108988 11 70646889 to 70646967 78 - TSS region transcription start site region 108988
Tssr108989 11 70646972 to 70647047 75 - TSS region transcription start site region 108989
Tssr108990 11 70647052 to 70647063 11 - TSS region transcription start site region 108990
Rnf167 11 70647243 to 70651421 4178 + protein coding gene ring finger protein 167
Tssr102755 11 70647258 to 70647294 36 + TSS region transcription start site region 102755
Tssr102756 11 70647295 to 70647306 11 + TSS region transcription start site region 102756
Tssr102757 11 70647312 to 70647323 11 + TSS region transcription start site region 102757
Tssr102758 11 70647541 to 70647581 40 + TSS region transcription start site region 102758
Tssr102759 11 70647586 to 70647607 21 + TSS region transcription start site region 102759
Tssr102760 11 70647613 to 70647635 22 + TSS region transcription start site region 102760
Tssr102761 11 70647653 to 70647658 5 + TSS region transcription start site region 102761
Tssr102762 11 70647875 to 70647904 29 + TSS region transcription start site region 102762
Tssr102763 11 70647906 to 70647918 12 + TSS region transcription start site region 102763
Tssr102764 11 70647932 to 70647948 16 + TSS region transcription start site region 102764
Tssr108991 11 70649008 to 70649015 7 - TSS region transcription start site region 108991
Tssr102765 11 70649906 to 70649927 21 + TSS region transcription start site region 102765
Tssr108992 11 70650333 to 70650337 4 - TSS region transcription start site region 108992
Tssr102766 11 70650637 to 70650650 13 + TSS region transcription start site region 102766
Tssr102767 11 70651100 to 70651124 24 + TSS region transcription start site region 102767
Pfn1 11 70651850 to 70654644 2794 - protein coding gene profilin 1
Tssr108993 11 70651869 to 70651873 4 - TSS region transcription start site region 108993
Tssr102768 11 70652036 to 70652128 92 + TSS region transcription start site region 102768
Tssr108994 11 70652076 to 70652087 11 - TSS region transcription start site region 108994
Tssr108995 11 70652098 to 70652154 56 - TSS region transcription start site region 108995
Tssr102769 11 70652131 to 70652149 18 + TSS region transcription start site region 102769
Tssr108996 11 70652164 to 70652194 30 - TSS region transcription start site region 108996
Tssr108997 11 70652196 to 70652207 11 - TSS region transcription start site region 108997
Tssr108998 11 70652214 to 70652225 11 - TSS region transcription start site region 108998
Tssr102770 11 70652807 to 70652838 31 + TSS region transcription start site region 102770
Tssr108999 11 70652822 to 70652868 46 - TSS region transcription start site region 108999
Tssr109000 11 70652877 to 70652914 37 - TSS region transcription start site region 109000
Tssr102771 11 70652925 to 70652946 21 + TSS region transcription start site region 102771
Tssr109001 11 70652926 to 70652936 10 - TSS region transcription start site region 109001
Tssr109002 11 70652948 to 70652988 40 - TSS region transcription start site region 109002
Tssr109003 11 70653002 to 70653011 9 - TSS region transcription start site region 109003
Tssr109004 11 70653032 to 70653047 15 - TSS region transcription start site region 109004
Tssr109005 11 70653232 to 70653305 73 - TSS region transcription start site region 109005
Cpgi3194 11 70653580 to 70656583 3003 CpG island CpG island 3194
Tssr109006 11 70653934 to 70654070 136 - TSS region transcription start site region 109006
Tssr102772 11 70654094 to 70654131 37 + TSS region transcription start site region 102772
Tssr109007 11 70654600 to 70654616 16 - TSS region transcription start site region 109007
Tssr109008 11 70654624 to 70654641 17 - TSS region transcription start site region 109008
Gm12319 11 70654741 to 70656493 1752 - lincRNA gene predicted gene 12319
Tssr109009 11 70654914 to 70654935 21 - TSS region transcription start site region 109009
Tssr109010 11 70655046 to 70655125 79 - TSS region transcription start site region 109010
Tssr102773 11 70655088 to 70655105 17 + TSS region transcription start site region 102773
Tssr109011 11 70655130 to 70655150 20 - TSS region transcription start site region 109011
Tssr102774 11 70655156 to 70655172 16 + TSS region transcription start site region 102774
Tssr109012 11 70655161 to 70655182 21 - TSS region transcription start site region 109012
1700029K24Rik 11 70655162 to 70655638 476 unclassified gene RIKEN cDNA 1700029K24 gene
Tssr109013 11 70655216 to 70655235 19 - TSS region transcription start site region 109013