Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:70510829-70570840

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tm4sf5 11 70505274 to 70511183 5909 + protein coding gene transmembrane 4 superfamily member 5
Tssr102721 11 70510837 to 70510849 12 + TSS region transcription start site region 102721
Tssr102722 11 70511062 to 70511075 13 + TSS region transcription start site region 102722
Tssr102723 11 70511090 to 70511101 11 + TSS region transcription start site region 102723
Tssr108976 11 70511168 to 70511182 14 - TSS region transcription start site region 108976
Vmo1 11 70513516 to 70514616 1100 - protein coding gene vitelline membrane outer layer 1 homolog (chicken)
Tssr108977 11 70514608 to 70514616 8 - TSS region transcription start site region 108977
Tssr108978 11 70514625 to 70514634 9 - TSS region transcription start site region 108978
Gm12317 11 70517725 to 70518043 318 - pseudogene predicted gene 12317
Tssr102724 11 70519156 to 70519161 5 + TSS region transcription start site region 102724
Tssr102725 11 70519168 to 70519175 7 + TSS region transcription start site region 102725
Tssr102726 11 70519183 to 70519203 20 + TSS region transcription start site region 102726
Gltpd2 11 70519209 to 70520736 1527 + protein coding gene glycolipid transfer protein domain containing 2
Tssr102727 11 70519619 to 70519640 21 + TSS region transcription start site region 102727
Cpgi3187 11 70519933 to 70520695 762 CpG island CpG island 3187
Cpgi3188 11 70525253 to 70525542 289 CpG island CpG island 3188
Tssr102728 11 70525361 to 70525394 33 + TSS region transcription start site region 102728
Psmb6 11 70525367 to 70527858 2491 + protein coding gene proteasome (prosome, macropain) subunit, beta type 6
Tssr102729 11 70525909 to 70525931 22 + TSS region transcription start site region 102729
Tssr102730 11 70525954 to 70525975 21 + TSS region transcription start site region 102730
Tssr102731 11 70525981 to 70526034 53 + TSS region transcription start site region 102731
Tssr102732 11 70528914 to 70528930 16 + TSS region transcription start site region 102732
Gm40193 11 70532232 to 70532939 707 - lncRNA gene predicted gene, 40193
Cpgi3189 11 70539762 to 70540749 987 CpG island CpG island 3189
Gm10418 11 70540023 to 70540600 577 - pseudogene predicted gene 10418
Tssr102733 11 70540045 to 70540069 24 + TSS region transcription start site region 102733
Pld2 11 70540064 to 70558110 18046 + protein coding gene phospholipase D2
Tssr102734 11 70540171 to 70540194 23 + TSS region transcription start site region 102734
Tssr102735 11 70540260 to 70540315 55 + TSS region transcription start site region 102735
Tssr102736 11 70540490 to 70540508 18 + TSS region transcription start site region 102736
Tssr102737 11 70540509 to 70540546 37 + TSS region transcription start site region 102737
Tssr102738 11 70540829 to 70540840 11 + TSS region transcription start site region 102738
Tssr102739 11 70540853 to 70540888 35 + TSS region transcription start site region 102739
Tssr102740 11 70540891 to 70540907 16 + TSS region transcription start site region 102740
Tssr102741 11 70540911 to 70540918 7 + TSS region transcription start site region 102741
Cpgi3190 11 70562294 to 70563591 1297 CpG island CpG island 3190
Tssr102742 11 70562840 to 70562897 57 + TSS region transcription start site region 102742
Mink1 11 70562881 to 70614483 51602 + protein coding gene misshapen-like kinase 1 (zebrafish)
Tssr102743 11 70562898 to 70562922 24 + TSS region transcription start site region 102743
Tssr102744 11 70562935 to 70562946 11 + TSS region transcription start site region 102744
Tssr102745 11 70562980 to 70563031 51 + TSS region transcription start site region 102745
Tssr102746 11 70564335 to 70564338 3 + TSS region transcription start site region 102746
2700008L21Rik 11 70570718 to 70571339 621 unclassified gene RIKEN cDNA 2700008L21 gene