Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:70467898-70657922

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148 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr102712 11 70468111 to 70468136 25 + TSS region transcription start site region 102712
Tssr102713 11 70469001 to 70469013 12 + TSS region transcription start site region 102713
Tssr108975 11 70489859 to 70489863 4 - TSS region transcription start site region 108975
Tssr102714 11 70497798 to 70497850 52 + TSS region transcription start site region 102714
Pgia7 11 70499762 to 70499911 149 QTL proteoglycan induced arthritis 7
D11Mit90 11 70499762 to 70499911 149 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 90
Tssr102715 11 70505255 to 70505312 57 + TSS region transcription start site region 102715
Tm4sf5 11 70505274 to 70511183 5909 + protein coding gene transmembrane 4 superfamily member 5
Tssr102716 11 70505314 to 70505332 18 + TSS region transcription start site region 102716
Tssr102717 11 70509691 to 70509793 102 + TSS region transcription start site region 102717
Tssr102718 11 70509961 to 70509990 29 + TSS region transcription start site region 102718
Tssr102719 11 70510180 to 70510199 19 + TSS region transcription start site region 102719
Tssr102720 11 70510245 to 70510255 10 + TSS region transcription start site region 102720
Tssr102721 11 70510837 to 70510849 12 + TSS region transcription start site region 102721
Tssr102722 11 70511062 to 70511075 13 + TSS region transcription start site region 102722
Tssr102723 11 70511090 to 70511101 11 + TSS region transcription start site region 102723
Tssr108976 11 70511168 to 70511182 14 - TSS region transcription start site region 108976
Vmo1 11 70513516 to 70514616 1100 - protein coding gene vitelline membrane outer layer 1 homolog (chicken)
Tssr108977 11 70514608 to 70514616 8 - TSS region transcription start site region 108977
Tssr108978 11 70514625 to 70514634 9 - TSS region transcription start site region 108978
Gm12317 11 70517725 to 70518043 318 - pseudogene predicted gene 12317
Tssr102724 11 70519156 to 70519161 5 + TSS region transcription start site region 102724
Tssr102725 11 70519168 to 70519175 7 + TSS region transcription start site region 102725
Tssr102726 11 70519183 to 70519203 20 + TSS region transcription start site region 102726
Gltpd2 11 70519209 to 70520736 1527 + protein coding gene glycolipid transfer protein domain containing 2
Tssr102727 11 70519619 to 70519640 21 + TSS region transcription start site region 102727
Cpgi3187 11 70519933 to 70520695 762 CpG island CpG island 3187
Cpgi3188 11 70525253 to 70525542 289 CpG island CpG island 3188
Tssr102728 11 70525361 to 70525394 33 + TSS region transcription start site region 102728
Psmb6 11 70525367 to 70527858 2491 + protein coding gene proteasome (prosome, macropain) subunit, beta type 6
Tssr102729 11 70525909 to 70525931 22 + TSS region transcription start site region 102729
Tssr102730 11 70525954 to 70525975 21 + TSS region transcription start site region 102730
Tssr102731 11 70525981 to 70526034 53 + TSS region transcription start site region 102731
Tssr102732 11 70528914 to 70528930 16 + TSS region transcription start site region 102732
Gm40193 11 70532232 to 70532939 707 - lncRNA gene predicted gene, 40193
Cpgi3189 11 70539762 to 70540749 987 CpG island CpG island 3189
Gm10418 11 70540023 to 70540600 577 - pseudogene predicted gene 10418
Tssr102733 11 70540045 to 70540069 24 + TSS region transcription start site region 102733
Pld2 11 70540064 to 70558110 18046 + protein coding gene phospholipase D2
Tssr102734 11 70540171 to 70540194 23 + TSS region transcription start site region 102734
Tssr102735 11 70540260 to 70540315 55 + TSS region transcription start site region 102735
Tssr102736 11 70540490 to 70540508 18 + TSS region transcription start site region 102736
Tssr102737 11 70540509 to 70540546 37 + TSS region transcription start site region 102737
Tssr102738 11 70540829 to 70540840 11 + TSS region transcription start site region 102738
Tssr102739 11 70540853 to 70540888 35 + TSS region transcription start site region 102739
Tssr102740 11 70540891 to 70540907 16 + TSS region transcription start site region 102740
Tssr102741 11 70540911 to 70540918 7 + TSS region transcription start site region 102741
Cpgi3190 11 70562294 to 70563591 1297 CpG island CpG island 3190
Tssr102742 11 70562840 to 70562897 57 + TSS region transcription start site region 102742
Mink1 11 70562881 to 70614483 51602 + protein coding gene misshapen-like kinase 1 (zebrafish)
Tssr102743 11 70562898 to 70562922 24 + TSS region transcription start site region 102743
Tssr102744 11 70562935 to 70562946 11 + TSS region transcription start site region 102744
Tssr102745 11 70562980 to 70563031 51 + TSS region transcription start site region 102745
Tssr102746 11 70564335 to 70564338 3 + TSS region transcription start site region 102746
2700008L21Rik 11 70570718 to 70571339 621 unclassified gene RIKEN cDNA 2700008L21 gene
Tssr108979 11 70587157 to 70587160 3 - TSS region transcription start site region 108979
Tssr102747 11 70606656 to 70606670 14 + TSS region transcription start site region 102747
Tssr102748 11 70607101 to 70607113 12 + TSS region transcription start site region 102748
Gm12316 11 70611212 to 70613211 1999 - antisense lncRNA gene predicted gene 12316
Chrne 11 70614883 to 70619216 4333 - protein coding gene cholinergic receptor, nicotinic, epsilon polypeptide
Cpgi3191 11 70615120 to 70615901 781 CpG island CpG island 3191
Tssr108980 11 70615545 to 70615559 14 - TSS region transcription start site region 108980
Tssr108981 11 70615572 to 70615591 19 - TSS region transcription start site region 108981
Tssr108982 11 70615645 to 70615656 11 - TSS region transcription start site region 108982
Tssr108983 11 70615657 to 70615670 13 - TSS region transcription start site region 108983
Tssr108984 11 70615672 to 70615690 18 - TSS region transcription start site region 108984
Tssr108985 11 70615692 to 70615718 26 - TSS region transcription start site region 108985
Tssr102749 11 70615836 to 70615841 5 + TSS region transcription start site region 102749
4930544D05Rik 11 70615848 to 70616890 1042 + protein coding gene RIKEN cDNA 4930544D05 gene
Tssr102750 11 70615862 to 70615876 14 + TSS region transcription start site region 102750
Tssr102751 11 70615888 to 70615900 12 + TSS region transcription start site region 102751
Cpgi3192 11 70616339 to 70616699 360 CpG island CpG island 3192
Tssr108986 11 70619195 to 70619207 12 - TSS region transcription start site region 108986
D11Mit210 11 70619874 to 70620003 129 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 210
Gm12315 11 70623027 to 70625561 2534 - lincRNA gene predicted gene 12315
Tssr102752 11 70639118 to 70639175 57 + TSS region transcription start site region 102752
Gp1ba 11 70639122 to 70642036 2914 + protein coding gene glycoprotein 1b, alpha polypeptide
Tssr102753 11 70640219 to 70640246 27 + TSS region transcription start site region 102753
Tssr102754 11 70640361 to 70640372 11 + TSS region transcription start site region 102754
Slc25a11 11 70644196 to 70647479 3283 - protein coding gene solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11
Cpgi3193 11 70646569 to 70648125 1556 CpG island CpG island 3193
Tssr108987 11 70646864 to 70646888 24 - TSS region transcription start site region 108987
Tssr108988 11 70646889 to 70646967 78 - TSS region transcription start site region 108988
Tssr108989 11 70646972 to 70647047 75 - TSS region transcription start site region 108989
Tssr108990 11 70647052 to 70647063 11 - TSS region transcription start site region 108990
Rnf167 11 70647243 to 70651421 4178 + protein coding gene ring finger protein 167
Tssr102755 11 70647258 to 70647294 36 + TSS region transcription start site region 102755
Tssr102756 11 70647295 to 70647306 11 + TSS region transcription start site region 102756
Tssr102757 11 70647312 to 70647323 11 + TSS region transcription start site region 102757
Tssr102758 11 70647541 to 70647581 40 + TSS region transcription start site region 102758
Tssr102759 11 70647586 to 70647607 21 + TSS region transcription start site region 102759
Tssr102760 11 70647613 to 70647635 22 + TSS region transcription start site region 102760
Tssr102761 11 70647653 to 70647658 5 + TSS region transcription start site region 102761
Tssr102762 11 70647875 to 70647904 29 + TSS region transcription start site region 102762
Tssr102763 11 70647906 to 70647918 12 + TSS region transcription start site region 102763
Tssr102764 11 70647932 to 70647948 16 + TSS region transcription start site region 102764
Tssr108991 11 70649008 to 70649015 7 - TSS region transcription start site region 108991
Tssr102765 11 70649906 to 70649927 21 + TSS region transcription start site region 102765
Tssr108992 11 70650333 to 70650337 4 - TSS region transcription start site region 108992
Tssr102766 11 70650637 to 70650650 13 + TSS region transcription start site region 102766
Tssr102767 11 70651100 to 70651124 24 + TSS region transcription start site region 102767
Pfn1 11 70651850 to 70654644 2794 - protein coding gene profilin 1
Tssr108993 11 70651869 to 70651873 4 - TSS region transcription start site region 108993
Tssr102768 11 70652036 to 70652128 92 + TSS region transcription start site region 102768
Tssr108994 11 70652076 to 70652087 11 - TSS region transcription start site region 108994
Tssr108995 11 70652098 to 70652154 56 - TSS region transcription start site region 108995
Tssr102769 11 70652131 to 70652149 18 + TSS region transcription start site region 102769
Tssr108996 11 70652164 to 70652194 30 - TSS region transcription start site region 108996
Tssr108997 11 70652196 to 70652207 11 - TSS region transcription start site region 108997
Tssr108998 11 70652214 to 70652225 11 - TSS region transcription start site region 108998
Tssr102770 11 70652807 to 70652838 31 + TSS region transcription start site region 102770
Tssr108999 11 70652822 to 70652868 46 - TSS region transcription start site region 108999
Tssr109000 11 70652877 to 70652914 37 - TSS region transcription start site region 109000
Tssr102771 11 70652925 to 70652946 21 + TSS region transcription start site region 102771
Tssr109001 11 70652926 to 70652936 10 - TSS region transcription start site region 109001
Tssr109002 11 70652948 to 70652988 40 - TSS region transcription start site region 109002
Tssr109003 11 70653002 to 70653011 9 - TSS region transcription start site region 109003
Tssr109004 11 70653032 to 70653047 15 - TSS region transcription start site region 109004
Tssr109005 11 70653232 to 70653305 73 - TSS region transcription start site region 109005
Cpgi3194 11 70653580 to 70656583 3003 CpG island CpG island 3194
Tssr109006 11 70653934 to 70654070 136 - TSS region transcription start site region 109006
Tssr102772 11 70654094 to 70654131 37 + TSS region transcription start site region 102772
Tssr109007 11 70654600 to 70654616 16 - TSS region transcription start site region 109007
Tssr109008 11 70654624 to 70654641 17 - TSS region transcription start site region 109008
Gm12319 11 70654741 to 70656493 1752 - lincRNA gene predicted gene 12319
Tssr109009 11 70654914 to 70654935 21 - TSS region transcription start site region 109009
Tssr109010 11 70655046 to 70655125 79 - TSS region transcription start site region 109010
Tssr102773 11 70655088 to 70655105 17 + TSS region transcription start site region 102773
Tssr109011 11 70655130 to 70655150 20 - TSS region transcription start site region 109011
Tssr102774 11 70655156 to 70655172 16 + TSS region transcription start site region 102774
Tssr109012 11 70655161 to 70655182 21 - TSS region transcription start site region 109012
1700029K24Rik 11 70655162 to 70655638 476 unclassified gene RIKEN cDNA 1700029K24 gene
Tssr109013 11 70655216 to 70655235 19 - TSS region transcription start site region 109013
Tssr109014 11 70656450 to 70656463 13 - TSS region transcription start site region 109014
Tssr109015 11 70656467 to 70656506 39 - TSS region transcription start site region 109015
Tssr109016 11 70656515 to 70656534 19 - TSS region transcription start site region 109016
Tssr102775 11 70656600 to 70656614 14 + TSS region transcription start site region 102775
Tssr102776 11 70656631 to 70656634 3 + TSS region transcription start site region 102776
Tssr102777 11 70656695 to 70656721 26 + TSS region transcription start site region 102777
Tssr102778 11 70656726 to 70656743 17 + TSS region transcription start site region 102778
Tssr109017 11 70656772 to 70656793 21 - TSS region transcription start site region 109017
Tssr102779 11 70656931 to 70656943 12 + TSS region transcription start site region 102779
Tssr102780 11 70656945 to 70656956 11 + TSS region transcription start site region 102780
Tssr102781 11 70657196 to 70657210 14 + TSS region transcription start site region 102781
Eno3 11 70657202 to 70662513 5311 + protein coding gene enolase 3, beta muscle
Tssr3570 11 70657755 to 70657760 5 + TSS region transcription start site region 3570
Tssr102782 11 70657816 to 70657831 15 + TSS region transcription start site region 102782
Tssr102783 11 70657834 to 70657859 25 + TSS region transcription start site region 102783