Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:70246844-70457003

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm40191 11 70239001 to 70269430 30429 + lncRNA gene predicted gene, 40191
Alox12 11 70241457 to 70255353 13896 - protein coding gene arachidonate 12-lipoxygenase
Cpgi3179 11 70254479 to 70255403 924 CpG island CpG island 3179
Tssr108940 11 70255329 to 70255347 18 - TSS region transcription start site region 108940
Gm32992 11 70280244 to 70285954 5710 + lncRNA gene predicted gene, 32992
Gm33048 11 70287377 to 70288384 1007 + lncRNA gene predicted gene, 33048
Gm40192 11 70290987 to 70294239 3252 + lncRNA gene predicted gene, 40192
Alox12e 11 70315610 to 70322628 7018 - protein coding gene arachidonate lipoxygenase, epidermal
Cpgi3180 11 70321657 to 70322423 766 CpG island CpG island 3180
Tssr108941 11 70322464 to 70322476 12 - TSS region transcription start site region 108941
Tssr108942 11 70322502 to 70322514 12 - TSS region transcription start site region 108942
Tssr108943 11 70322520 to 70322537 17 - TSS region transcription start site region 108943
Alox15 11 70344152 to 70352031 7879 - protein coding gene arachidonate 15-lipoxygenase
Tssr108944 11 70345702 to 70345723 21 - TSS region transcription start site region 108944
Cpgi3181 11 70351844 to 70352003 159 CpG island CpG island 3181
Tssr108945 11 70352029 to 70352032 3 - TSS region transcription start site region 108945
Gm12312 11 70358138 to 70358781 643 + pseudogene predicted gene 12312
Tssr108946 11 70358407 to 70358414 7 - TSS region transcription start site region 108946
Tssr108947 11 70381959 to 70381963 4 - TSS region transcription start site region 108947
Pelp1 11 70392883 to 70410031 17148 - protein coding gene proline, glutamic acid and leucine rich protein 1
Tssr108948 11 70394411 to 70394428 17 - TSS region transcription start site region 108948
Tssr108949 11 70407139 to 70407143 4 - TSS region transcription start site region 108949
Tssr108950 11 70408943 to 70408949 6 - TSS region transcription start site region 108950
Cpgi3182 11 70409479 to 70410493 1014 CpG island CpG island 3182
Tssr108951 11 70410010 to 70410042 32 - TSS region transcription start site region 108951
Gm12313 11 70426553 to 70426973 420 + pseudogene predicted gene 12313
Gm12314 11 70429016 to 70429553 537 - pseudogene predicted gene 12314
Cpgi3183 11 70432087 to 70433142 1055 CpG island CpG island 3183
Tssr102676 11 70432552 to 70432557 5 + TSS region transcription start site region 102676
Tssr102677 11 70432572 to 70432590 18 + TSS region transcription start site region 102677
Tssr102678 11 70432601 to 70432624 23 + TSS region transcription start site region 102678
Tssr102679 11 70432627 to 70432707 80 + TSS region transcription start site region 102679
Arrb2 11 70432635 to 70440828 8193 + protein coding gene arrestin, beta 2
Tssr108952 11 70433297 to 70433333 36 - TSS region transcription start site region 108952
Tssr3568 11 70433968 to 70433982 14 + TSS region transcription start site region 3568
Tssr102680 11 70435706 to 70435717 11 + TSS region transcription start site region 102680
Tssr102681 11 70436149 to 70436170 21 + TSS region transcription start site region 102681
Tssr102682 11 70436175 to 70436193 18 + TSS region transcription start site region 102682
Tssr102683 11 70436311 to 70436348 37 + TSS region transcription start site region 102683
Tssr102684 11 70436655 to 70436694 39 + TSS region transcription start site region 102684
Tssr102685 11 70437252 to 70437259 7 + TSS region transcription start site region 102685
Tssr102686 11 70437281 to 70437311 30 + TSS region transcription start site region 102686
Tssr102687 11 70437315 to 70437326 11 + TSS region transcription start site region 102687
Tssr102688 11 70437613 to 70437658 45 + TSS region transcription start site region 102688
Tssr102689 11 70437668 to 70437679 11 + TSS region transcription start site region 102689
Tssr102690 11 70437928 to 70437949 21 + TSS region transcription start site region 102690
Mir7115 11 70438255 to 70438318 63 + miRNA gene microRNA 7115
Tssr102691 11 70438677 to 70438695 18 + TSS region transcription start site region 102691
Tssr102692 11 70440314 to 70440338 24 + TSS region transcription start site region 102692
Cpgi3184 11 70451767 to 70452424 657 CpG island CpG island 3184
Tssr102693 11 70451905 to 70451950 45 + TSS region transcription start site region 102693
Med11 11 70451931 to 70453727 1796 + protein coding gene mediator complex subunit 11
Tssr102694 11 70451955 to 70451974 19 + TSS region transcription start site region 102694
Tssr102695 11 70452230 to 70452250 20 + TSS region transcription start site region 102695
Cxcl16 11 70454232 to 70459984 5752 - protein coding gene chemokine (C-X-C motif) ligand 16
Tssr108953 11 70454462 to 70454473 11 - TSS region transcription start site region 108953
Tssr108954 11 70454556 to 70454561 5 - TSS region transcription start site region 108954
Tssr102696 11 70455185 to 70455196 11 + TSS region transcription start site region 102696
Tssr108955 11 70455194 to 70455211 17 - TSS region transcription start site region 108955
Tssr108956 11 70455221 to 70455266 45 - TSS region transcription start site region 108956
Tssr108957 11 70455298 to 70455317 19 - TSS region transcription start site region 108957
Tssr108958 11 70455330 to 70455357 27 - TSS region transcription start site region 108958
Tssr102697 11 70455763 to 70455818 55 + TSS region transcription start site region 102697
Tssr102698 11 70455858 to 70455892 34 + TSS region transcription start site region 102698
Tssr108959 11 70455931 to 70455997 66 - TSS region transcription start site region 108959
Tssr102699 11 70456028 to 70456039 11 + TSS region transcription start site region 102699