Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:69997123-70187135

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3165 11 69995469 to 69997685 2216 CpG island CpG island 3165
Phf23 11 69995777 to 70000009 4232 + protein coding gene PHD finger protein 23
Tssr108909 11 69997244 to 69997258 14 - TSS region transcription start site region 108909
Tssr108910 11 69997293 to 69997328 35 - TSS region transcription start site region 108910
Tssr102621 11 69997441 to 69997501 60 + TSS region transcription start site region 102621
Tssr102622 11 69998367 to 69998388 21 + TSS region transcription start site region 102622
Tssr102623 11 69999316 to 69999330 14 + TSS region transcription start site region 102623
Cpgi3166 11 70000346 to 70001134 788 CpG island CpG island 3166
Tssr102624 11 70000578 to 70000624 46 + TSS region transcription start site region 102624
Dvl2 11 70000626 to 70010109 9483 + protein coding gene dishevelled segment polarity protein 2
Tssr102625 11 70000643 to 70000660 17 + TSS region transcription start site region 102625
Tssr102626 11 70000779 to 70000800 21 + TSS region transcription start site region 102626
Tssr102627 11 70000804 to 70000831 27 + TSS region transcription start site region 102627
Acadvl 11 70010183 to 70015411 5228 - protein coding gene acyl-Coenzyme A dehydrogenase, very long chain
Mir324 11 70012043 to 70012131 88 + miRNA gene microRNA 324
Cpgi3167 11 70015025 to 70015544 519 CpG island CpG island 3167
Tssr108911 11 70015346 to 70015435 89 - TSS region transcription start site region 108911
Tssr102628 11 70017131 to 70017146 15 + TSS region transcription start site region 102628
Tssr102629 11 70017199 to 70017208 9 + TSS region transcription start site region 102629
Tssr102630 11 70018070 to 70018092 22 + TSS region transcription start site region 102630
Tssr102631 11 70018396 to 70018399 3 + TSS region transcription start site region 102631
Tssr102632 11 70018421 to 70018484 63 + TSS region transcription start site region 102632
Dlg4 11 70018455 to 70045535 27080 + protein coding gene discs large MAGUK scaffold protein 4
Tssr102633 11 70018834 to 70018847 13 + TSS region transcription start site region 102633
Cpgi3168 11 70021255 to 70021861 606 CpG island CpG island 3168
Cpgi3169 11 70023851 to 70024402 551 CpG island CpG island 3169
Tssr102634 11 70023922 to 70023958 36 + TSS region transcription start site region 102634
Cpgi3170 11 70026764 to 70027141 377 CpG island CpG island 3170
Tssr102635 11 70026815 to 70026853 38 + TSS region transcription start site region 102635
Tssr102636 11 70029813 to 70029837 24 + TSS region transcription start site region 102636
Tssr102637 11 70030072 to 70030083 11 + TSS region transcription start site region 102637
Tssr102638 11 70030130 to 70030141 11 + TSS region transcription start site region 102638
Tssr102639 11 70031374 to 70031385 11 + TSS region transcription start site region 102639
Tssr102640 11 70034964 to 70034972 8 + TSS region transcription start site region 102640
Tssr102641 11 70038531 to 70038553 22 + TSS region transcription start site region 102641
Tssr102642 11 70038562 to 70038587 25 + TSS region transcription start site region 102642
D11Mit243a 11 70041158 to 70041290 132 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 243a
D11Mit243b 11 70041223 to 70041290 67 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 243b
Tssr102643 11 70043096 to 70043107 11 + TSS region transcription start site region 102643
Tssr102644 11 70044601 to 70044603 2 + TSS region transcription start site region 102644
Tssr102645 11 70045319 to 70045323 4 + TSS region transcription start site region 102645
Tssr102646 11 70048410 to 70048413 3 + TSS region transcription start site region 102646
Asgr1 11 70054085 to 70057894 3809 + protein coding gene asialoglycoprotein receptor 1
Tssr102647 11 70054334 to 70054360 26 + TSS region transcription start site region 102647
Tssr102648 11 70054362 to 70054377 15 + TSS region transcription start site region 102648
Tssr102649 11 70054385 to 70054466 81 + TSS region transcription start site region 102649
Tssr102650 11 70056068 to 70056084 16 + TSS region transcription start site region 102650
Tssr102651 11 70056854 to 70056895 41 + TSS region transcription start site region 102651
Gm32946 11 70077671 to 70091265 13594 + lncRNA gene predicted gene, 32946
Tssr108912 11 70092123 to 70092135 12 - TSS region transcription start site region 108912
Tssr102652 11 70092634 to 70092643 9 + TSS region transcription start site region 102652
Asgr2 11 70092644 to 70106187 13543 + protein coding gene asialoglycoprotein receptor 2
Tssr102653 11 70092646 to 70092651 5 + TSS region transcription start site region 102653
Tssr102654 11 70092653 to 70092698 45 + TSS region transcription start site region 102654
Tssr102655 11 70092705 to 70092749 44 + TSS region transcription start site region 102655
Tssr102656 11 70106272 to 70106274 2 + TSS region transcription start site region 102656
Gm12311 11 70128969 to 70129342 373 - pseudogene predicted gene 12311
Tssr102657 11 70130143 to 70130163 20 + TSS region transcription start site region 102657
Mgl2 11 70130329 to 70137550 7221 + protein coding gene macrophage galactose N-acetyl-galactosamine specific lectin 2
Tssr102658 11 70130392 to 70130411 19 + TSS region transcription start site region 102658
Tssr108913 11 70153581 to 70153582 1 - TSS region transcription start site region 108913
Clec10a 11 70166623 to 70170836 4213 + protein coding gene C-type lectin domain family 10, member A
Tssr102659 11 70166648 to 70166663 15 + TSS region transcription start site region 102659
Tssr102660 11 70166696 to 70166707 11 + TSS region transcription start site region 102660
Tssr102661 11 70166766 to 70166784 18 + TSS region transcription start site region 102661
Tssr102662 11 70167184 to 70167198 14 + TSS region transcription start site region 102662
Tssr102663 11 70167202 to 70167222 20 + TSS region transcription start site region 102663
Tssr108914 11 70185221 to 70185242 21 - TSS region transcription start site region 108914