Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:69940830-70020841

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95 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ybx2 11 69935834 to 69941604 5770 + protein coding gene Y box protein 2
Tssr102576 11 69941063 to 69941078 15 + TSS region transcription start site region 102576
Tssr3565 11 69941089 to 69941099 10 + TSS region transcription start site region 3565
Tssr102577 11 69941240 to 69941271 31 + TSS region transcription start site region 102577
Tssr102578 11 69941324 to 69941329 5 + TSS region transcription start site region 102578
Slc2a4 11 69942539 to 69948188 5649 - protein coding gene solute carrier family 2 (facilitated glucose transporter), member 4
Tssr108897 11 69947409 to 69947432 23 - TSS region transcription start site region 108897
Cpgi3161 11 69947933 to 69949012 1079 CpG island CpG island 3161
Tssr108898 11 69948153 to 69948206 53 - TSS region transcription start site region 108898
Gm12310 11 69950798 to 69951289 491 + pseudogene predicted gene 12310
Tssr102579 11 69964758 to 69964811 53 + TSS region transcription start site region 102579
Cldn7 11 69964779 to 69967885 3106 + protein coding gene claudin 7
Cpgi3162 11 69964804 to 69967076 2272 CpG island CpG island 3162
Tssr108899 11 69965233 to 69965243 10 - TSS region transcription start site region 108899
Tssr102580 11 69965493 to 69965510 17 + TSS region transcription start site region 102580
Tssr102581 11 69965596 to 69965621 25 + TSS region transcription start site region 102581
Tssr102582 11 69965654 to 69965695 41 + TSS region transcription start site region 102582
Tssr102583 11 69965726 to 69965741 15 + TSS region transcription start site region 102583
Tssr102584 11 69965862 to 69965900 38 + TSS region transcription start site region 102584
Tssr3566 11 69966874 to 69966875 1 + TSS region transcription start site region 3566
Tssr102585 11 69966896 to 69966911 15 + TSS region transcription start site region 102585
Elp5 11 69968224 to 69981291 13067 - protein coding gene elongator acetyltransferase complex subunit 5
Tssr102586 11 69976652 to 69976668 16 + TSS region transcription start site region 102586
Cpgi3163 11 69980079 to 69981687 1608 CpG island CpG island 3163
Tssr108900 11 69980218 to 69980229 11 - TSS region transcription start site region 108900
Tssr108901 11 69980233 to 69980271 38 - TSS region transcription start site region 108901
Tssr108902 11 69980274 to 69980290 16 - TSS region transcription start site region 108902
Tssr108903 11 69980468 to 69980575 107 - TSS region transcription start site region 108903
Gm44349 11 69980692 to 69980814 122 + miRNA gene predicted gene, 44349
Tssr102587 11 69980751 to 69980762 11 + TSS region transcription start site region 102587
Tssr102588 11 69980768 to 69980779 11 + TSS region transcription start site region 102588
Tssr102589 11 69980780 to 69980828 48 + TSS region transcription start site region 102589
Tssr102590 11 69980830 to 69980841 11 + TSS region transcription start site region 102590
Tssr102591 11 69981039 to 69981086 47 + TSS region transcription start site region 102591
Tssr102592 11 69981127 to 69981214 87 + TSS region transcription start site region 102592
Ctdnep1 11 69981168 to 69990601 9433 + protein coding gene CTD nuclear envelope phosphatase 1
Tssr108904 11 69981228 to 69981240 12 - TSS region transcription start site region 108904
Tssr108905 11 69981242 to 69981264 22 - TSS region transcription start site region 108905
Tssr102593 11 69981255 to 69981260 5 + TSS region transcription start site region 102593
Tssr108906 11 69981281 to 69981293 12 - TSS region transcription start site region 108906
Tssr102594 11 69981332 to 69981369 37 + TSS region transcription start site region 102594
Tssr102595 11 69981381 to 69981390 9 + TSS region transcription start site region 102595
Tssr102596 11 69981460 to 69981471 11 + TSS region transcription start site region 102596
Tssr102597 11 69981475 to 69981480 5 + TSS region transcription start site region 102597
Tssr102598 11 69981491 to 69981502 11 + TSS region transcription start site region 102598
Tssr102599 11 69981522 to 69981533 11 + TSS region transcription start site region 102599
Tssr108907 11 69982630 to 69982669 39 - TSS region transcription start site region 108907
Tssr102600 11 69990451 to 69990483 32 + TSS region transcription start site region 102600
Cpgi3164 11 69990895 to 69991862 967 CpG island CpG island 3164
Tssr102601 11 69991061 to 69991074 13 + TSS region transcription start site region 102601
Gabarap 11 69991370 to 69994949 3579 + protein coding gene gamma-aminobutyric acid receptor associated protein
Tssr102602 11 69991583 to 69991630 47 + TSS region transcription start site region 102602
Tssr102603 11 69991633 to 69991638 5 + TSS region transcription start site region 102603
Tssr102604 11 69991641 to 69991674 33 + TSS region transcription start site region 102604
Tssr102605 11 69991675 to 69991684 9 + TSS region transcription start site region 102605
Tssr102606 11 69991698 to 69991712 14 + TSS region transcription start site region 102606
Tssr102607 11 69992367 to 69992385 18 + TSS region transcription start site region 102607
Tssr102608 11 69992510 to 69992541 31 + TSS region transcription start site region 102608
Tssr102609 11 69992575 to 69992640 65 + TSS region transcription start site region 102609
Tssr102610 11 69994455 to 69994466 11 + TSS region transcription start site region 102610
Tssr102611 11 69994479 to 69994490 11 + TSS region transcription start site region 102611
Tssr102612 11 69994506 to 69994517 11 + TSS region transcription start site region 102612
Tssr102613 11 69994539 to 69994556 17 + TSS region transcription start site region 102613
Tssr102614 11 69994585 to 69994596 11 + TSS region transcription start site region 102614
Tssr102615 11 69994601 to 69994613 12 + TSS region transcription start site region 102615
Tssr102616 11 69994675 to 69994724 49 + TSS region transcription start site region 102616
Tssr102617 11 69994734 to 69994743 9 + TSS region transcription start site region 102617
Cpgi3165 11 69995469 to 69997685 2216 CpG island CpG island 3165
Phf23 11 69995777 to 70000009 4232 + protein coding gene PHD finger protein 23
Tssr102618 11 69995798 to 69995812 14 + TSS region transcription start site region 102618
Tssr102619 11 69995826 to 69995870 44 + TSS region transcription start site region 102619
Tssr102620 11 69995874 to 69995897 23 + TSS region transcription start site region 102620
Tssr108908 11 69996870 to 69996875 5 - TSS region transcription start site region 108908
Tssr108909 11 69997244 to 69997258 14 - TSS region transcription start site region 108909
Tssr108910 11 69997293 to 69997328 35 - TSS region transcription start site region 108910
Tssr102621 11 69997441 to 69997501 60 + TSS region transcription start site region 102621
Tssr102622 11 69998367 to 69998388 21 + TSS region transcription start site region 102622
Tssr102623 11 69999316 to 69999330 14 + TSS region transcription start site region 102623
Cpgi3166 11 70000346 to 70001134 788 CpG island CpG island 3166
Tssr102624 11 70000578 to 70000624 46 + TSS region transcription start site region 102624
Dvl2 11 70000626 to 70010109 9483 + protein coding gene dishevelled segment polarity protein 2
Tssr102625 11 70000643 to 70000660 17 + TSS region transcription start site region 102625
Tssr102626 11 70000779 to 70000800 21 + TSS region transcription start site region 102626
Tssr102627 11 70000804 to 70000831 27 + TSS region transcription start site region 102627
Acadvl 11 70010183 to 70015411 5228 - protein coding gene acyl-Coenzyme A dehydrogenase, very long chain
Mir324 11 70012043 to 70012131 88 + miRNA gene microRNA 324
Cpgi3167 11 70015025 to 70015544 519 CpG island CpG island 3167
Tssr108911 11 70015346 to 70015435 89 - TSS region transcription start site region 108911
Tssr102628 11 70017131 to 70017146 15 + TSS region transcription start site region 102628
Tssr102629 11 70017199 to 70017208 9 + TSS region transcription start site region 102629
Tssr102630 11 70018070 to 70018092 22 + TSS region transcription start site region 102630
Tssr102631 11 70018396 to 70018399 3 + TSS region transcription start site region 102631
Tssr102632 11 70018421 to 70018484 63 + TSS region transcription start site region 102632
Dlg4 11 70018455 to 70045535 27080 + protein coding gene discs large MAGUK scaffold protein 4
Tssr102633 11 70018834 to 70018847 13 + TSS region transcription start site region 102633