Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:69917539-69973188

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eif5a 11 69916714 to 69921958 5244 - protein coding gene eukaryotic translation initiation factor 5A
Tssr108880 11 69917699 to 69917734 35 - TSS region transcription start site region 108880
Tssr102559 11 69919910 to 69919915 5 + TSS region transcription start site region 102559
Cpgi3158 11 69920153 to 69922039 1886 CpG island CpG island 3158
Tssr108881 11 69920483 to 69920519 36 - TSS region transcription start site region 108881
Tssr108882 11 69920520 to 69920535 15 - TSS region transcription start site region 108882
Tssr108883 11 69920537 to 69920580 43 - TSS region transcription start site region 108883
Tssr108884 11 69920581 to 69920591 10 - TSS region transcription start site region 108884
Tssr108885 11 69920849 to 69920875 26 - TSS region transcription start site region 108885
Tssr108886 11 69920892 to 69920966 74 - TSS region transcription start site region 108886
Tssr108887 11 69921057 to 69921077 20 - TSS region transcription start site region 108887
Tssr3563 11 69921209 to 69921218 9 - TSS region transcription start site region 3563
Tssr108888 11 69921227 to 69921243 16 - TSS region transcription start site region 108888
Tssr108889 11 69921244 to 69921323 79 - TSS region transcription start site region 108889
Tssr108890 11 69921329 to 69921347 18 - TSS region transcription start site region 108890
Tssr3564 11 69921400 to 69921403 3 - TSS region transcription start site region 3564
Tssr102560 11 69921732 to 69921762 30 + TSS region transcription start site region 102560
Tssr102561 11 69921779 to 69921839 60 + TSS region transcription start site region 102561
Tssr102562 11 69921996 to 69922006 10 + TSS region transcription start site region 102562
Cpgi3159 11 69934272 to 69934514 242 CpG island CpG island 3159
Cpgi3160 11 69935209 to 69936466 1257 CpG island CpG island 3160
Tssr102563 11 69935695 to 69935703 8 + TSS region transcription start site region 102563
Tssr108891 11 69935756 to 69935765 9 - TSS region transcription start site region 108891
Tssr102564 11 69935797 to 69935817 20 + TSS region transcription start site region 102564
Tssr102565 11 69935818 to 69935843 25 + TSS region transcription start site region 102565
Ybx2 11 69935834 to 69941604 5770 + protein coding gene Y box protein 2
Tssr102566 11 69935845 to 69935854 9 + TSS region transcription start site region 102566
Tssr102567 11 69935865 to 69935883 18 + TSS region transcription start site region 102567
Tssr102568 11 69935894 to 69935931 37 + TSS region transcription start site region 102568
Tssr102569 11 69935935 to 69935965 30 + TSS region transcription start site region 102569
Tssr102570 11 69935989 to 69936000 11 + TSS region transcription start site region 102570
Tssr108892 11 69936148 to 69936161 13 - TSS region transcription start site region 108892
Tssr108893 11 69936172 to 69936211 39 - TSS region transcription start site region 108893
Tssr108894 11 69936233 to 69936279 46 - TSS region transcription start site region 108894
Tssr108895 11 69939318 to 69939325 7 - TSS region transcription start site region 108895
Tssr102571 11 69939902 to 69939913 11 + TSS region transcription start site region 102571
Tssr102572 11 69940107 to 69940116 9 + TSS region transcription start site region 102572
Tssr102573 11 69940383 to 69940390 7 + TSS region transcription start site region 102573
Tssr102574 11 69940586 to 69940599 13 + TSS region transcription start site region 102574
Tssr108896 11 69940634 to 69940646 12 - TSS region transcription start site region 108896
Tssr102575 11 69940719 to 69940735 16 + TSS region transcription start site region 102575
Tssr102576 11 69941063 to 69941078 15 + TSS region transcription start site region 102576
Tssr3565 11 69941089 to 69941099 10 + TSS region transcription start site region 3565
Tssr102577 11 69941240 to 69941271 31 + TSS region transcription start site region 102577
Tssr102578 11 69941324 to 69941329 5 + TSS region transcription start site region 102578
Slc2a4 11 69942539 to 69948188 5649 - protein coding gene solute carrier family 2 (facilitated glucose transporter), member 4
Tssr108897 11 69947409 to 69947432 23 - TSS region transcription start site region 108897
Cpgi3161 11 69947933 to 69949012 1079 CpG island CpG island 3161
Tssr108898 11 69948153 to 69948206 53 - TSS region transcription start site region 108898
Gm12310 11 69950798 to 69951289 491 + pseudogene predicted gene 12310
Tssr102579 11 69964758 to 69964811 53 + TSS region transcription start site region 102579
Cldn7 11 69964779 to 69967885 3106 + protein coding gene claudin 7
Cpgi3162 11 69964804 to 69967076 2272 CpG island CpG island 3162
Tssr108899 11 69965233 to 69965243 10 - TSS region transcription start site region 108899
Tssr102580 11 69965493 to 69965510 17 + TSS region transcription start site region 102580
Tssr102581 11 69965596 to 69965621 25 + TSS region transcription start site region 102581
Tssr102582 11 69965654 to 69965695 41 + TSS region transcription start site region 102582
Tssr102583 11 69965726 to 69965741 15 + TSS region transcription start site region 102583
Tssr102584 11 69965862 to 69965900 38 + TSS region transcription start site region 102584
Tssr3566 11 69966874 to 69966875 1 + TSS region transcription start site region 3566
Tssr102585 11 69966896 to 69966911 15 + TSS region transcription start site region 102585
Elp5 11 69968224 to 69981291 13067 - protein coding gene elongator acetyltransferase complex subunit 5