Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:69848030-69908058

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plscr3 11 69846376 to 69852058 5682 + protein coding gene phospholipid scramblase 3
Tnk1 11 69851005 to 69858730 7725 - protein coding gene tyrosine kinase, non-receptor, 1
Cpgi3154 11 69855429 to 69855749 320 CpG island CpG island 3154
Tssr108861 11 69858687 to 69858713 26 - TSS region transcription start site region 108861
Tssr108862 11 69858723 to 69858737 14 - TSS region transcription start site region 108862
Gm32708 11 69858797 to 69868244 9447 + lncRNA gene predicted gene, 32708
Tmem95 11 69876684 to 69878018 1334 - protein coding gene transmembrane protein 95
Tssr102542 11 69877236 to 69877244 8 + TSS region transcription start site region 102542
Tssr108863 11 69878030 to 69878058 28 - TSS region transcription start site region 108863
Kctd11 11 69878264 to 69880985 2721 - protein coding gene potassium channel tetramerisation domain containing 11
Cpgi3155 11 69880557 to 69881724 1167 CpG island CpG island 3155
Tssr108864 11 69880856 to 69880863 7 - TSS region transcription start site region 108864
Tssr108865 11 69880866 to 69880937 71 - TSS region transcription start site region 108865
Tssr108866 11 69880941 to 69880963 22 - TSS region transcription start site region 108866
Tssr108867 11 69880971 to 69880985 14 - TSS region transcription start site region 108867
Acap1 11 69881567 to 69895539 13972 - protein coding gene ArfGAP with coiled-coil, ankyrin repeat and PH domains 1
Mir6924 11 69882032 to 69882094 62 - miRNA gene microRNA 6924
Tssr102543 11 69884281 to 69884290 9 + TSS region transcription start site region 102543
Tssr108868 11 69892111 to 69892115 4 - TSS region transcription start site region 108868
Tssr108869 11 69894787 to 69894812 25 - TSS region transcription start site region 108869
Tssr102544 11 69895029 to 69895034 5 + TSS region transcription start site region 102544
Tssr108870 11 69895465 to 69895474 9 - TSS region transcription start site region 108870
Tssr108871 11 69895498 to 69895520 22 - TSS region transcription start site region 108871
Tssr108872 11 69895523 to 69895560 37 - TSS region transcription start site region 108872
2810408A11Rik 11 69897352 to 69900987 3635 - protein coding gene RIKEN cDNA 2810408A11 gene
Cpgi3156 11 69900607 to 69902464 1857 CpG island CpG island 3156
Tssr108873 11 69900880 to 69900881 1 - TSS region transcription start site region 108873
Tssr108874 11 69900896 to 69900929 33 - TSS region transcription start site region 108874
Tssr108875 11 69900930 to 69900941 11 - TSS region transcription start site region 108875
Tssr108876 11 69900949 to 69901001 52 - TSS region transcription start site region 108876
Tssr108877 11 69901034 to 69901041 7 - TSS region transcription start site region 108877
Tssr102545 11 69901128 to 69901143 15 + TSS region transcription start site region 102545
Tssr102546 11 69901704 to 69901758 54 + TSS region transcription start site region 102546
Neurl4 11 69901816 to 69913824 12008 + protein coding gene neuralized E3 ubiquitin protein ligase 4
Tssr102547 11 69901848 to 69901894 46 + TSS region transcription start site region 102547