Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:69820429-69890749

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spem1 11 69820871 to 69822165 1294 - protein coding gene sperm maturation 1
Tssr108851 11 69822144 to 69822162 18 - TSS region transcription start site region 108851
Nlgn2 11 69823122 to 69837784 14662 - protein coding gene neuroligin 2
Cpgi3151 11 69833624 to 69834498 874 CpG island CpG island 3151
Tssr108852 11 69834665 to 69834675 10 - TSS region transcription start site region 108852
Cpgi3152 11 69836804 to 69838574 1770 CpG island CpG island 3152
Tssr108853 11 69837080 to 69837121 41 - TSS region transcription start site region 108853
Tssr108854 11 69837161 to 69837210 49 - TSS region transcription start site region 108854
Tssr108855 11 69837287 to 69837297 10 - TSS region transcription start site region 108855
Tssr108856 11 69837500 to 69837514 14 - TSS region transcription start site region 108856
Tssr108857 11 69837736 to 69837764 28 - TSS region transcription start site region 108857
Tssr108858 11 69837766 to 69837776 10 - TSS region transcription start site region 108858
Tssr108859 11 69837781 to 69837787 6 - TSS region transcription start site region 108859
Tssr108860 11 69838003 to 69838038 35 - TSS region transcription start site region 108860
Tmem256 11 69838525 to 69839558 1033 + protein coding gene transmembrane protein 256
Tssr102535 11 69838525 to 69838567 42 + TSS region transcription start site region 102535
Cpgi3153 11 69846149 to 69847290 1141 CpG island CpG island 3153
Tssr102536 11 69846374 to 69846387 13 + TSS region transcription start site region 102536
Plscr3 11 69846376 to 69852058 5682 + protein coding gene phospholipid scramblase 3
Tssr102537 11 69846610 to 69846659 49 + TSS region transcription start site region 102537
Tssr102538 11 69846665 to 69846681 16 + TSS region transcription start site region 102538
Tssr102539 11 69846850 to 69846947 97 + TSS region transcription start site region 102539
Tssr102540 11 69847333 to 69847380 47 + TSS region transcription start site region 102540
Tssr102541 11 69847467 to 69847489 22 + TSS region transcription start site region 102541
Tnk1 11 69851005 to 69858730 7725 - protein coding gene tyrosine kinase, non-receptor, 1
Cpgi3154 11 69855429 to 69855749 320 CpG island CpG island 3154
Tssr108861 11 69858687 to 69858713 26 - TSS region transcription start site region 108861
Tssr108862 11 69858723 to 69858737 14 - TSS region transcription start site region 108862
Gm32708 11 69858797 to 69868244 9447 + lncRNA gene predicted gene, 32708
Tmem95 11 69876684 to 69878018 1334 - protein coding gene transmembrane protein 95
Tssr102542 11 69877236 to 69877244 8 + TSS region transcription start site region 102542
Tssr108863 11 69878030 to 69878058 28 - TSS region transcription start site region 108863
Kctd11 11 69878264 to 69880985 2721 - protein coding gene potassium channel tetramerisation domain containing 11
Cpgi3155 11 69880557 to 69881724 1167 CpG island CpG island 3155
Tssr108864 11 69880856 to 69880863 7 - TSS region transcription start site region 108864
Tssr108865 11 69880866 to 69880937 71 - TSS region transcription start site region 108865
Tssr108866 11 69880941 to 69880963 22 - TSS region transcription start site region 108866
Tssr108867 11 69880971 to 69880985 14 - TSS region transcription start site region 108867
Acap1 11 69881567 to 69895539 13972 - protein coding gene ArfGAP with coiled-coil, ankyrin repeat and PH domains 1
Mir6924 11 69882032 to 69882094 62 - miRNA gene microRNA 6924
Tssr102543 11 69884281 to 69884290 9 + TSS region transcription start site region 102543