Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:69690249-69780262

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79 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tnfsf13os 11 69682138 to 69691141 9003 + antisense lncRNA gene tumor necrosis factor (ligand) superfamily, member 13, opposite strand
Tnfsfm13 11 69682577 to 69696098 13521 - protein coding gene tumor necrosis factor (ligand) superfamily, membrane-bound member 13
Tnfsf12 11 69686250 to 69695849 9599 - protein coding gene tumor necrosis factor (ligand) superfamily, member 12
Tssr102526 11 69692649 to 69692662 13 + TSS region transcription start site region 102526
Tssr108795 11 69693537 to 69693552 15 - TSS region transcription start site region 108795
Tssr108796 11 69693651 to 69693667 16 - TSS region transcription start site region 108796
Cpgi3143 11 69695603 to 69696084 481 CpG island CpG island 3143
Tssr108797 11 69695639 to 69695713 74 - TSS region transcription start site region 108797
Tssr108798 11 69695753 to 69695785 32 - TSS region transcription start site region 108798
Tssr108799 11 69695802 to 69695872 70 - TSS region transcription start site region 108799
Tssr108800 11 69695881 to 69695900 19 - TSS region transcription start site region 108800
Tssr108801 11 69695948 to 69695959 11 - TSS region transcription start site region 108801
Tssr108802 11 69695988 to 69696011 23 - TSS region transcription start site region 108802
Tssr108803 11 69696037 to 69696055 18 - TSS region transcription start site region 108803
Tssr108804 11 69696058 to 69696102 44 - TSS region transcription start site region 108804
Gm12307 11 69729995 to 69730584 589 - pseudogene predicted gene 12307
D11Mit60 11 69733658 to 69733962 304 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 60
Polr2a 11 69733997 to 69758633 24636 - protein coding gene polymerase (RNA) II (DNA directed) polypeptide A
Tssr3545 11 69734609 to 69734654 45 - TSS region transcription start site region 3545
Tssr3546 11 69734658 to 69734665 7 - TSS region transcription start site region 3546
Tssr3547 11 69734679 to 69734695 16 - TSS region transcription start site region 3547
Tssr3548 11 69734703 to 69734717 14 - TSS region transcription start site region 3548
Tssr3549 11 69734720 to 69734727 7 - TSS region transcription start site region 3549
Tssr108805 11 69734728 to 69734729 1 - TSS region transcription start site region 108805
Tssr3550 11 69734730 to 69734742 12 - TSS region transcription start site region 3550
Tssr108806 11 69734760 to 69734768 8 - TSS region transcription start site region 108806
Tssr108807 11 69734771 to 69734776 5 - TSS region transcription start site region 108807
Tssr108808 11 69734790 to 69734793 3 - TSS region transcription start site region 108808
Tssr3551 11 69734798 to 69734826 28 - TSS region transcription start site region 3551
Tssr3552 11 69734831 to 69734835 4 - TSS region transcription start site region 3552
Tssr108809 11 69734851 to 69734860 9 - TSS region transcription start site region 108809
Tssr108810 11 69734892 to 69734903 11 - TSS region transcription start site region 108810
Tssr108811 11 69734908 to 69734919 11 - TSS region transcription start site region 108811
Tssr108812 11 69734923 to 69734943 20 - TSS region transcription start site region 108812
Tssr108813 11 69734947 to 69734959 12 - TSS region transcription start site region 108813
Tssr3553 11 69734965 to 69734973 8 - TSS region transcription start site region 3553
Tssr108814 11 69734975 to 69734987 12 - TSS region transcription start site region 108814
Tssr108815 11 69735018 to 69735023 5 - TSS region transcription start site region 108815
Tssr108816 11 69735034 to 69735039 5 - TSS region transcription start site region 108816
Tssr108817 11 69735044 to 69735053 9 - TSS region transcription start site region 108817
Tssr108818 11 69735080 to 69735092 12 - TSS region transcription start site region 108818
Tssr3554 11 69735113 to 69735151 38 - TSS region transcription start site region 3554
Tssr108819 11 69735177 to 69735191 14 - TSS region transcription start site region 108819
Tssr3555 11 69735219 to 69735226 7 - TSS region transcription start site region 3555
Tssr108820 11 69735232 to 69735244 12 - TSS region transcription start site region 108820
Tssr3556 11 69735249 to 69735262 13 - TSS region transcription start site region 3556
Tssr3557 11 69735273 to 69735276 3 - TSS region transcription start site region 3557
Tssr108821 11 69735284 to 69735295 11 - TSS region transcription start site region 108821
Tssr108822 11 69735313 to 69735322 9 - TSS region transcription start site region 108822
Tssr108823 11 69735326 to 69735337 11 - TSS region transcription start site region 108823
Tssr3558 11 69735341 to 69735355 14 - TSS region transcription start site region 3558
Tssr108824 11 69735356 to 69735367 11 - TSS region transcription start site region 108824
Tssr108825 11 69735375 to 69735386 11 - TSS region transcription start site region 108825
Tssr108826 11 69735388 to 69735399 11 - TSS region transcription start site region 108826
Tssr3559 11 69735406 to 69735412 6 - TSS region transcription start site region 3559
Tssr3560 11 69735414 to 69735432 18 - TSS region transcription start site region 3560
Tssr3561 11 69735434 to 69735443 9 - TSS region transcription start site region 3561
Tssr108827 11 69735468 to 69735510 42 - TSS region transcription start site region 108827
Tssr3562 11 69735557 to 69735572 15 - TSS region transcription start site region 3562
Cpgi3144 11 69758046 to 69759362 1316 CpG island CpG island 3144
Tssr108828 11 69758177 to 69758201 24 - TSS region transcription start site region 108828
Tssr102527 11 69758288 to 69758296 8 + TSS region transcription start site region 102527
Tssr108829 11 69758361 to 69758392 31 - TSS region transcription start site region 108829
Tssr108830 11 69758630 to 69758642 12 - TSS region transcription start site region 108830
Tssr102528 11 69758856 to 69758869 13 + TSS region transcription start site region 102528
Slc35g3 11 69759884 to 69761844 1960 - protein coding gene solute carrier family 35, member G3
Tssr108831 11 69761682 to 69761710 28 - TSS region transcription start site region 108831
Tssr108832 11 69761889 to 69761899 10 - TSS region transcription start site region 108832
Tssr108833 11 69761909 to 69761927 18 - TSS region transcription start site region 108833
Tssr108834 11 69761936 to 69761952 16 - TSS region transcription start site region 108834
Tssr108835 11 69761963 to 69761972 9 - TSS region transcription start site region 108835
Cpgi3145 11 69765518 to 69766695 1177 CpG island CpG island 3145
Tssr102529 11 69765899 to 69765925 26 + TSS region transcription start site region 102529
Zbtb4 11 69765912 to 69784023 18111 + protein coding gene zinc finger and BTB domain containing 4
Tssr102530 11 69765970 to 69766027 57 + TSS region transcription start site region 102530
Tssr102531 11 69766495 to 69766559 64 + TSS region transcription start site region 102531
Tssr102532 11 69776082 to 69776110 28 + TSS region transcription start site region 102532
Tssr102533 11 69777599 to 69777612 13 + TSS region transcription start site region 102533
Cpgi3146 11 69778328 to 69778582 254 CpG island CpG island 3146