Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 11:69684658-69784665

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73 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lmrq4 11 12268637 to 69684947 57416310 QTL Leishmania major resistance QTL 4
Char8 11 35578616 to 69684987 34106371 QTL P. chabaudi malaria resistance QTL 8
Chrnb1 11 69674862 to 69686769 11907 - protein coding gene cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)
D11Mit29 11 69684807 to 69684947 140 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 29
D11Mit30 11 69684810 to 69684987 177 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 30
Cpgi3147 11 69686152 to 69686822 670 CpG island CpG island 3147
Tssr108836 11 69686721 to 69686748 27 - TSS region transcription start site region 108836
Tssr108837 11 69686756 to 69686773 17 - TSS region transcription start site region 108837
Fgf11 11 69686894 to 69692683 5789 - protein coding gene fibroblast growth factor 11
Tssr108838 11 69687985 to 69688005 20 - TSS region transcription start site region 108838
Tssr108839 11 69688187 to 69688209 22 - TSS region transcription start site region 108839
Tssr108840 11 69690763 to 69690792 29 - TSS region transcription start site region 108840
Cpgi3148 11 69690970 to 69692673 1703 CpG island CpG island 3148
Tssr102534 11 69691600 to 69691621 21 + TSS region transcription start site region 102534
6720407P12Rik 11 69692962 to 69693761 799 - lncRNA gene RIKEN cDNA 6720407P12 gene
Cpgi3149 11 69693424 to 69694025 601 CpG island CpG island 3149
Tssr108841 11 69693716 to 69693767 51 - TSS region transcription start site region 108841
Cpgi3150 11 69694360 to 69695310 950 CpG island CpG island 3150
Tmem102 11 69694429 to 69696450 2021 - protein coding gene transmembrane protein 102
G630025P09Rik 11 69694495 to 69696864 2369 + lncRNA gene RIKEN cDNA G630025P09 gene
Tssr108842 11 69696289 to 69696293 4 - TSS region transcription start site region 108842
Tssr108843 11 69696443 to 69696499 56 - TSS region transcription start site region 108843
Gm39566 11 69701791 to 69706124 4333 - protein coding gene predicted gene, 39566
Tssr108844 11 69704782 to 69704792 10 - TSS region transcription start site region 108844
Tssr108845 11 69706142 to 69706175 33 - TSS region transcription start site region 108845
Spem2 11 69707392 to 69709291 1899 - protein coding gene SPEM family member 2
Tssr108846 11 69707725 to 69707728 3 - TSS region transcription start site region 108846
Tssr108847 11 69708559 to 69708594 35 - TSS region transcription start site region 108847
Tssr108848 11 69708732 to 69708752 20 - TSS region transcription start site region 108848
Tssr108849 11 69709283 to 69709294 11 - TSS region transcription start site region 108849
Tssr108850 11 69709301 to 69709318 17 - TSS region transcription start site region 108850
Spem1 11 69711697 to 69712991 1294 - protein coding gene sperm maturation 1
Tssr108851 11 69712970 to 69712988 18 - TSS region transcription start site region 108851
Nlgn2 11 69713949 to 69728610 14661 - protein coding gene neuroligin 2
Cpgi3151 11 69724450 to 69725324 874 CpG island CpG island 3151
Tssr108852 11 69725491 to 69725501 10 - TSS region transcription start site region 108852
Cpgi3152 11 69727630 to 69729400 1770 CpG island CpG island 3152
Tssr108853 11 69727906 to 69727947 41 - TSS region transcription start site region 108853
Tssr108854 11 69727987 to 69728036 49 - TSS region transcription start site region 108854
Tssr108855 11 69728113 to 69728123 10 - TSS region transcription start site region 108855
Tssr108856 11 69728326 to 69728340 14 - TSS region transcription start site region 108856
Tssr108857 11 69728562 to 69728590 28 - TSS region transcription start site region 108857
Tssr108858 11 69728592 to 69728602 10 - TSS region transcription start site region 108858
Tssr108859 11 69728607 to 69728613 6 - TSS region transcription start site region 108859
Tssr108860 11 69728829 to 69728864 35 - TSS region transcription start site region 108860
Tmem256 11 69729340 to 69730444 1104 + protein coding gene transmembrane protein 256
Tssr102535 11 69729351 to 69729393 42 + TSS region transcription start site region 102535
Cpgi3153 11 69736975 to 69738116 1141 CpG island CpG island 3153
Tssr102536 11 69737200 to 69737213 13 + TSS region transcription start site region 102536
Plscr3 11 69737202 to 69742884 5682 + protein coding gene phospholipid scramblase 3
Tssr102537 11 69737436 to 69737485 49 + TSS region transcription start site region 102537
Tssr102538 11 69737491 to 69737507 16 + TSS region transcription start site region 102538
Tssr102539 11 69737676 to 69737773 97 + TSS region transcription start site region 102539
Tssr102540 11 69738159 to 69738206 47 + TSS region transcription start site region 102540
Tssr102541 11 69738293 to 69738315 22 + TSS region transcription start site region 102541
Tnk1 11 69741831 to 69749556 7725 - protein coding gene tyrosine kinase, non-receptor, 1
Cpgi3154 11 69746255 to 69746575 320 CpG island CpG island 3154
Tssr108861 11 69749513 to 69749539 26 - TSS region transcription start site region 108861
Tssr108862 11 69749549 to 69749563 14 - TSS region transcription start site region 108862
Gm32708 11 69749581 to 69759070 9489 + lncRNA gene predicted gene, 32708
Tmem95 11 69766883 to 69768879 1996 - protein coding gene transmembrane protein 95
Tssr102542 11 69768062 to 69768070 8 + TSS region transcription start site region 102542
Tssr108863 11 69768856 to 69768884 28 - TSS region transcription start site region 108863
Kctd11 11 69769090 to 69771811 2721 - protein coding gene potassium channel tetramerisation domain containing 11
Cpgi3155 11 69771383 to 69772550 1167 CpG island CpG island 3155
Tssr108864 11 69771682 to 69771689 7 - TSS region transcription start site region 108864
Tssr108865 11 69771692 to 69771763 71 - TSS region transcription start site region 108865
Tssr108866 11 69771767 to 69771789 22 - TSS region transcription start site region 108866
Tssr108867 11 69771797 to 69771811 14 - TSS region transcription start site region 108867
Acap1 11 69772393 to 69786365 13972 - protein coding gene ArfGAP with coiled-coil, ankyrin repeat and PH domains 1
Mir6924 11 69772858 to 69772920 62 - miRNA gene microRNA 6924
Tssr102543 11 69775107 to 69775116 9 + TSS region transcription start site region 102543
Tssr108868 11 69782937 to 69782941 4 - TSS region transcription start site region 108868