Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 11:69634658-69834665

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172 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lmrq4 11 12268637 to 69684947 57416310 QTL Leishmania major resistance QTL 4
Char8 11 35578616 to 69684987 34106371 QTL P. chabaudi malaria resistance QTL 8
Polr2a 11 69624823 to 69649459 24636 - protein coding gene polymerase (RNA) II (DNA directed) polypeptide A
Cpgi3144 11 69648872 to 69650188 1316 CpG island CpG island 3144
Tssr108828 11 69649003 to 69649027 24 - TSS region transcription start site region 108828
Tssr102527 11 69649114 to 69649122 8 + TSS region transcription start site region 102527
Tssr108829 11 69649187 to 69649218 31 - TSS region transcription start site region 108829
Tssr108830 11 69649456 to 69649468 12 - TSS region transcription start site region 108830
Tssr102528 11 69649682 to 69649695 13 + TSS region transcription start site region 102528
Slc35g3 11 69650710 to 69652670 1960 - protein coding gene solute carrier family 35, member G3
Tssr108831 11 69652508 to 69652536 28 - TSS region transcription start site region 108831
Tssr108832 11 69652715 to 69652725 10 - TSS region transcription start site region 108832
Tssr108833 11 69652735 to 69652753 18 - TSS region transcription start site region 108833
Tssr108834 11 69652762 to 69652778 16 - TSS region transcription start site region 108834
Tssr108835 11 69652789 to 69652798 9 - TSS region transcription start site region 108835
Cpgi3145 11 69656344 to 69657521 1177 CpG island CpG island 3145
Tssr102529 11 69656725 to 69656751 26 + TSS region transcription start site region 102529
Zbtb4 11 69656738 to 69674849 18111 + protein coding gene zinc finger and BTB domain containing 4
Tssr102530 11 69656796 to 69656853 57 + TSS region transcription start site region 102530
Tssr102531 11 69657321 to 69657385 64 + TSS region transcription start site region 102531
Tssr102532 11 69666908 to 69666936 28 + TSS region transcription start site region 102532
Tssr102533 11 69668425 to 69668438 13 + TSS region transcription start site region 102533
Cpgi3146 11 69669154 to 69669408 254 CpG island CpG island 3146
Chrnb1 11 69674862 to 69686769 11907 - protein coding gene cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)
D11Nds16 11 69683152 to 69683315 163 DNA segment DNA segment, Chr 11, Nuffield Department of Surgery 16
D11Mit29 11 69684807 to 69684947 140 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 29
D11Mit30 11 69684810 to 69684987 177 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 30
Cpgi3147 11 69686152 to 69686822 670 CpG island CpG island 3147
Tssr108836 11 69686721 to 69686748 27 - TSS region transcription start site region 108836
Tssr108837 11 69686756 to 69686773 17 - TSS region transcription start site region 108837
Fgf11 11 69686894 to 69692683 5789 - protein coding gene fibroblast growth factor 11
Tssr108838 11 69687985 to 69688005 20 - TSS region transcription start site region 108838
Tssr108839 11 69688187 to 69688209 22 - TSS region transcription start site region 108839
Tssr108840 11 69690763 to 69690792 29 - TSS region transcription start site region 108840
Cpgi3148 11 69690970 to 69692673 1703 CpG island CpG island 3148
Tssr102534 11 69691600 to 69691621 21 + TSS region transcription start site region 102534
6720407P12Rik 11 69692962 to 69693761 799 - lncRNA gene RIKEN cDNA 6720407P12 gene
Cpgi3149 11 69693424 to 69694025 601 CpG island CpG island 3149
Tssr108841 11 69693716 to 69693767 51 - TSS region transcription start site region 108841
Cpgi3150 11 69694360 to 69695310 950 CpG island CpG island 3150
Tmem102 11 69694429 to 69696450 2021 - protein coding gene transmembrane protein 102
G630025P09Rik 11 69694495 to 69696864 2369 + lncRNA gene RIKEN cDNA G630025P09 gene
Tssr108842 11 69696289 to 69696293 4 - TSS region transcription start site region 108842
Tssr108843 11 69696443 to 69696499 56 - TSS region transcription start site region 108843
Gm39566 11 69701791 to 69706124 4333 - protein coding gene predicted gene, 39566
Tssr108844 11 69704782 to 69704792 10 - TSS region transcription start site region 108844
Tssr108845 11 69706142 to 69706175 33 - TSS region transcription start site region 108845
Spem2 11 69707392 to 69709291 1899 - protein coding gene SPEM family member 2
Tssr108846 11 69707725 to 69707728 3 - TSS region transcription start site region 108846
Tssr108847 11 69708559 to 69708594 35 - TSS region transcription start site region 108847
Tssr108848 11 69708732 to 69708752 20 - TSS region transcription start site region 108848
Tssr108849 11 69709283 to 69709294 11 - TSS region transcription start site region 108849
Tssr108850 11 69709301 to 69709318 17 - TSS region transcription start site region 108850
Spem1 11 69711697 to 69712991 1294 - protein coding gene sperm maturation 1
Tssr108851 11 69712970 to 69712988 18 - TSS region transcription start site region 108851
Nlgn2 11 69713949 to 69728610 14661 - protein coding gene neuroligin 2
Cpgi3151 11 69724450 to 69725324 874 CpG island CpG island 3151
Tssr108852 11 69725491 to 69725501 10 - TSS region transcription start site region 108852
Cpgi3152 11 69727630 to 69729400 1770 CpG island CpG island 3152
Tssr108853 11 69727906 to 69727947 41 - TSS region transcription start site region 108853
Tssr108854 11 69727987 to 69728036 49 - TSS region transcription start site region 108854
Tssr108855 11 69728113 to 69728123 10 - TSS region transcription start site region 108855
Tssr108856 11 69728326 to 69728340 14 - TSS region transcription start site region 108856
Tssr108857 11 69728562 to 69728590 28 - TSS region transcription start site region 108857
Tssr108858 11 69728592 to 69728602 10 - TSS region transcription start site region 108858
Tssr108859 11 69728607 to 69728613 6 - TSS region transcription start site region 108859
Tssr108860 11 69728829 to 69728864 35 - TSS region transcription start site region 108860
Tmem256 11 69729340 to 69730444 1104 + protein coding gene transmembrane protein 256
Tssr102535 11 69729351 to 69729393 42 + TSS region transcription start site region 102535
Cpgi3153 11 69736975 to 69738116 1141 CpG island CpG island 3153
Tssr102536 11 69737200 to 69737213 13 + TSS region transcription start site region 102536
Plscr3 11 69737202 to 69742884 5682 + protein coding gene phospholipid scramblase 3
Tssr102537 11 69737436 to 69737485 49 + TSS region transcription start site region 102537
Tssr102538 11 69737491 to 69737507 16 + TSS region transcription start site region 102538
Tssr102539 11 69737676 to 69737773 97 + TSS region transcription start site region 102539
Tssr102540 11 69738159 to 69738206 47 + TSS region transcription start site region 102540
Tssr102541 11 69738293 to 69738315 22 + TSS region transcription start site region 102541
Tnk1 11 69741831 to 69749556 7725 - protein coding gene tyrosine kinase, non-receptor, 1
Cpgi3154 11 69746255 to 69746575 320 CpG island CpG island 3154
Tssr108861 11 69749513 to 69749539 26 - TSS region transcription start site region 108861
Tssr108862 11 69749549 to 69749563 14 - TSS region transcription start site region 108862
Gm32708 11 69749581 to 69759070 9489 + lncRNA gene predicted gene, 32708
Tmem95 11 69766883 to 69768879 1996 - protein coding gene transmembrane protein 95
Tssr102542 11 69768062 to 69768070 8 + TSS region transcription start site region 102542
Tssr108863 11 69768856 to 69768884 28 - TSS region transcription start site region 108863
Kctd11 11 69769090 to 69771811 2721 - protein coding gene potassium channel tetramerisation domain containing 11
Cpgi3155 11 69771383 to 69772550 1167 CpG island CpG island 3155
Tssr108864 11 69771682 to 69771689 7 - TSS region transcription start site region 108864
Tssr108865 11 69771692 to 69771763 71 - TSS region transcription start site region 108865
Tssr108866 11 69771767 to 69771789 22 - TSS region transcription start site region 108866
Tssr108867 11 69771797 to 69771811 14 - TSS region transcription start site region 108867
Acap1 11 69772393 to 69786365 13972 - protein coding gene ArfGAP with coiled-coil, ankyrin repeat and PH domains 1
Mir6924 11 69772858 to 69772920 62 - miRNA gene microRNA 6924
Tssr102543 11 69775107 to 69775116 9 + TSS region transcription start site region 102543
Tssr108868 11 69782937 to 69782941 4 - TSS region transcription start site region 108868
Tssr108869 11 69785613 to 69785638 25 - TSS region transcription start site region 108869
Tssr102544 11 69785855 to 69785860 5 + TSS region transcription start site region 102544
Tssr108870 11 69786291 to 69786300 9 - TSS region transcription start site region 108870
Tssr108871 11 69786324 to 69786346 22 - TSS region transcription start site region 108871
Tssr108872 11 69786349 to 69786386 37 - TSS region transcription start site region 108872
2810408A11Rik 11 69788178 to 69791813 3635 - protein coding gene RIKEN cDNA 2810408A11 gene
Cpgi3156 11 69791433 to 69793290 1857 CpG island CpG island 3156
Tssr108873 11 69791706 to 69791707 1 - TSS region transcription start site region 108873
Tssr108874 11 69791722 to 69791755 33 - TSS region transcription start site region 108874
Tssr108875 11 69791756 to 69791767 11 - TSS region transcription start site region 108875
Tssr108876 11 69791775 to 69791827 52 - TSS region transcription start site region 108876
Tssr108877 11 69791860 to 69791867 7 - TSS region transcription start site region 108877
Tssr102545 11 69791954 to 69791969 15 + TSS region transcription start site region 102545
Tssr102546 11 69792530 to 69792584 54 + TSS region transcription start site region 102546
Neurl4 11 69792545 to 69804650 12105 + protein coding gene neuralized E3 ubiquitin protein ligase 4
Tssr102547 11 69792674 to 69792720 46 + TSS region transcription start site region 102547
Tssr102548 11 69799832 to 69799843 11 + TSS region transcription start site region 102548
Tssr102549 11 69799846 to 69799858 12 + TSS region transcription start site region 102549
Tssr102550 11 69802155 to 69802174 19 + TSS region transcription start site region 102550
Tssr102551 11 69802176 to 69802186 10 + TSS region transcription start site region 102551
Cpgi3157 11 69804166 to 69805535 1369 CpG island CpG island 3157
Gps2 11 69804714 to 69807417 2703 + protein coding gene G protein pathway suppressor 2
Tssr102552 11 69804834 to 69804904 70 + TSS region transcription start site region 102552
Tssr102553 11 69804978 to 69804989 11 + TSS region transcription start site region 102553
Tssr102554 11 69805005 to 69805019 14 + TSS region transcription start site region 102554
Tssr102555 11 69805062 to 69805092 30 + TSS region transcription start site region 102555
Tssr102556 11 69805112 to 69805123 11 + TSS region transcription start site region 102556
Tssr102557 11 69806866 to 69806881 15 + TSS region transcription start site region 102557
Eif5a 11 69807540 to 69812784 5244 - protein coding gene eukaryotic translation initiation factor 5A
Tssr108878 11 69807801 to 69807828 27 - TSS region transcription start site region 108878
Tssr108879 11 69808068 to 69808098 30 - TSS region transcription start site region 108879
Tssr102558 11 69808126 to 69808140 14 + TSS region transcription start site region 102558
Tssr108880 11 69808525 to 69808560 35 - TSS region transcription start site region 108880
Tssr102559 11 69810736 to 69810741 5 + TSS region transcription start site region 102559
Cpgi3158 11 69810979 to 69812865 1886 CpG island CpG island 3158
Tssr108881 11 69811309 to 69811345 36 - TSS region transcription start site region 108881
Tssr108882 11 69811346 to 69811361 15 - TSS region transcription start site region 108882
Tssr108883 11 69811363 to 69811406 43 - TSS region transcription start site region 108883
Tssr108884 11 69811407 to 69811417 10 - TSS region transcription start site region 108884
Tssr108885 11 69811675 to 69811701 26 - TSS region transcription start site region 108885
Tssr108886 11 69811718 to 69811792 74 - TSS region transcription start site region 108886
Tssr108887 11 69811883 to 69811903 20 - TSS region transcription start site region 108887
Tssr3563 11 69812035 to 69812044 9 - TSS region transcription start site region 3563
Tssr108888 11 69812053 to 69812069 16 - TSS region transcription start site region 108888
Tssr108889 11 69812070 to 69812149 79 - TSS region transcription start site region 108889
Tssr108890 11 69812155 to 69812173 18 - TSS region transcription start site region 108890
Tssr3564 11 69812226 to 69812229 3 - TSS region transcription start site region 3564
Tssr102560 11 69812558 to 69812588 30 + TSS region transcription start site region 102560
Tssr102561 11 69812605 to 69812665 60 + TSS region transcription start site region 102561
Tssr102562 11 69812822 to 69812832 10 + TSS region transcription start site region 102562
Cpgi3159 11 69825098 to 69825340 242 CpG island CpG island 3159
Cpgi3160 11 69826035 to 69827292 1257 CpG island CpG island 3160
Tssr102563 11 69826521 to 69826529 8 + TSS region transcription start site region 102563
Tssr108891 11 69826582 to 69826591 9 - TSS region transcription start site region 108891
Tssr102564 11 69826623 to 69826643 20 + TSS region transcription start site region 102564
Tssr102565 11 69826644 to 69826669 25 + TSS region transcription start site region 102565
Tssr102566 11 69826671 to 69826680 9 + TSS region transcription start site region 102566
Tssr102567 11 69826691 to 69826709 18 + TSS region transcription start site region 102567
Ybx2 11 69826711 to 69832429 5718 + protein coding gene Y box protein 2
Tssr102568 11 69826720 to 69826757 37 + TSS region transcription start site region 102568
Tssr102569 11 69826761 to 69826791 30 + TSS region transcription start site region 102569
Tssr102570 11 69826815 to 69826826 11 + TSS region transcription start site region 102570
Tssr108892 11 69826974 to 69826987 13 - TSS region transcription start site region 108892
Tssr108893 11 69826998 to 69827037 39 - TSS region transcription start site region 108893
Tssr108894 11 69827059 to 69827105 46 - TSS region transcription start site region 108894
Tssr108895 11 69830144 to 69830151 7 - TSS region transcription start site region 108895
Tssr102571 11 69830728 to 69830739 11 + TSS region transcription start site region 102571
Tssr102572 11 69830933 to 69830942 9 + TSS region transcription start site region 102572
Tssr102573 11 69831209 to 69831216 7 + TSS region transcription start site region 102573
Tssr102574 11 69831412 to 69831425 13 + TSS region transcription start site region 102574
Tssr108896 11 69831460 to 69831472 12 - TSS region transcription start site region 108896
Tssr102575 11 69831545 to 69831561 16 + TSS region transcription start site region 102575
Tssr102576 11 69831889 to 69831904 15 + TSS region transcription start site region 102576
Tssr3565 11 69831915 to 69831925 10 + TSS region transcription start site region 3565
Tssr102577 11 69832066 to 69832097 31 + TSS region transcription start site region 102577
Tssr102578 11 69832150 to 69832155 5 + TSS region transcription start site region 102578
Slc2a4 11 69833365 to 69839014 5649 - protein coding gene solute carrier family 2 (facilitated glucose transporter), member 4