Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:69592786-69692788

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151 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atp1b2 11 69599736 to 69605942 6206 - protein coding gene ATPase, Na+/K+ transporting, beta 2 polypeptide
Tssr108712 11 69600007 to 69600018 11 - TSS region transcription start site region 108712
Tssr102487 11 69600013 to 69600040 27 + TSS region transcription start site region 102487
Tssr108713 11 69600152 to 69600169 17 - TSS region transcription start site region 108713
Tssr108714 11 69600234 to 69600237 3 - TSS region transcription start site region 108714
Tssr108715 11 69600247 to 69600271 24 - TSS region transcription start site region 108715
Tssr108716 11 69600559 to 69600575 16 - TSS region transcription start site region 108716
Tssr108717 11 69600584 to 69600589 5 - TSS region transcription start site region 108717
Tssr108718 11 69600643 to 69600653 10 - TSS region transcription start site region 108718
Tssr108719 11 69600654 to 69600655 1 - TSS region transcription start site region 108719
Tssr108720 11 69600658 to 69600671 13 - TSS region transcription start site region 108720
Tssr108721 11 69600672 to 69600680 8 - TSS region transcription start site region 108721
Tssr3544 11 69600695 to 69600704 9 - TSS region transcription start site region 3544
Tssr108722 11 69600753 to 69600758 5 - TSS region transcription start site region 108722
Tssr108723 11 69600781 to 69600795 14 - TSS region transcription start site region 108723
Tssr108724 11 69600834 to 69600841 7 - TSS region transcription start site region 108724
Tssr108725 11 69600858 to 69600863 5 - TSS region transcription start site region 108725
Tssr108726 11 69600953 to 69600965 12 - TSS region transcription start site region 108726
Tssr108727 11 69600975 to 69600986 11 - TSS region transcription start site region 108727
Tssr108728 11 69601019 to 69601030 11 - TSS region transcription start site region 108728
Tssr108729 11 69601106 to 69601115 9 - TSS region transcription start site region 108729
Tssr108730 11 69601138 to 69601147 9 - TSS region transcription start site region 108730
Tssr102488 11 69601163 to 69601203 40 + TSS region transcription start site region 102488
Tssr108731 11 69601169 to 69601189 20 - TSS region transcription start site region 108731
Tssr108732 11 69601230 to 69601250 20 - TSS region transcription start site region 108732
Tssr102489 11 69601238 to 69601249 11 + TSS region transcription start site region 102489
Tssr108733 11 69602452 to 69602465 13 - TSS region transcription start site region 108733
Tssr108734 11 69602743 to 69602783 40 - TSS region transcription start site region 108734
Tssr108735 11 69602810 to 69602832 22 - TSS region transcription start site region 108735
Tssr108736 11 69602848 to 69602860 12 - TSS region transcription start site region 108736
Tssr108737 11 69603538 to 69603562 24 - TSS region transcription start site region 108737
Ppiq9a 11 69603559 to 69603559 0 QTL prepulse inhibition QTL 9a
Cpgi3137 11 69604691 to 69606028 1337 CpG island CpG island 3137
Tssr108738 11 69605953 to 69605971 18 - TSS region transcription start site region 108738
Shbg 11 69614804 to 69617905 3101 - protein coding gene sex hormone binding globulin
Tssr108739 11 69616974 to 69616985 11 - TSS region transcription start site region 108739
Tssr108740 11 69617589 to 69617594 5 - TSS region transcription start site region 108740
Tssr108741 11 69617722 to 69617739 17 - TSS region transcription start site region 108741
Tssr108742 11 69617861 to 69617873 12 - TSS region transcription start site region 108742
Tssr108743 11 69617879 to 69617926 47 - TSS region transcription start site region 108743
Tssr108744 11 69618069 to 69618085 16 - TSS region transcription start site region 108744
Sat2 11 69622024 to 69623870 1846 + protein coding gene spermidine/spermine N1-acetyl transferase 2
Tssr102490 11 69622044 to 69622101 57 + TSS region transcription start site region 102490
Gm12308 11 69630924 to 69631312 388 - pseudogene predicted gene 12308
Tssr108745 11 69631333 to 69631343 10 - TSS region transcription start site region 108745
Gm12309 11 69631522 to 69631703 181 - pseudogene predicted gene 12309
Cpgi3138 11 69632468 to 69633829 1361 CpG island CpG island 3138
Tssr102491 11 69632927 to 69633002 75 + TSS region transcription start site region 102491
Fxr2 11 69632990 to 69653297 20307 + protein coding gene fragile X mental retardation, autosomal homolog 2
Tssr102492 11 69633042 to 69633053 11 + TSS region transcription start site region 102492
Tssr102493 11 69633256 to 69633284 28 + TSS region transcription start site region 102493
Tssr102494 11 69633745 to 69633750 5 + TSS region transcription start site region 102494
Mir467f 11 69635400 to 69635519 119 - miRNA gene microRNA 467f
Tssr102495 11 69642786 to 69642788 2 + TSS region transcription start site region 102495
Tssr102496 11 69645169 to 69645178 9 + TSS region transcription start site region 102496
Tssr102497 11 69654999 to 69655013 14 + TSS region transcription start site region 102497
Tssr102498 11 69655029 to 69655055 26 + TSS region transcription start site region 102498
Sox15 11 69655314 to 69656727 1413 + protein coding gene SRY (sex determining region Y)-box 15
Cpgi3139 11 69655380 to 69655921 541 CpG island CpG island 3139
Tssr102499 11 69655559 to 69655567 8 + TSS region transcription start site region 102499
Tssr102500 11 69655584 to 69655608 24 + TSS region transcription start site region 102500
Tssr102501 11 69655617 to 69655630 13 + TSS region transcription start site region 102501
Tssr102502 11 69655711 to 69655733 22 + TSS region transcription start site region 102502
Tssr102503 11 69655808 to 69655819 11 + TSS region transcription start site region 102503
Tssr102504 11 69655840 to 69655857 17 + TSS region transcription start site region 102504
Tssr102505 11 69656522 to 69656532 10 + TSS region transcription start site region 102505
Mpdu1 11 69656697 to 69662642 5945 - protein coding gene mannose-P-dolichol utilization defect 1
Cpgi3140 11 69662187 to 69662943 756 CpG island CpG island 3140
Tssr102506 11 69662353 to 69662380 27 + TSS region transcription start site region 102506
Tssr108746 11 69662569 to 69662596 27 - TSS region transcription start site region 108746
Tssr108747 11 69662625 to 69662636 11 - TSS region transcription start site region 108747
Tssr102507 11 69662638 to 69662646 8 + TSS region transcription start site region 102507
Mir1934 11 69663043 to 69663125 82 + miRNA gene microRNA 1934
Tssr102508 11 69664170 to 69664184 14 + TSS region transcription start site region 102508
Tssr102509 11 69664212 to 69664219 7 + TSS region transcription start site region 102509
Cd68 11 69664213 to 69666153 1940 - protein coding gene CD68 antigen
Tssr102510 11 69664325 to 69664353 28 + TSS region transcription start site region 102510
Tssr108748 11 69664366 to 69664382 16 - TSS region transcription start site region 108748
Tssr102511 11 69664367 to 69664388 21 + TSS region transcription start site region 102511
Tssr108749 11 69664387 to 69664459 72 - TSS region transcription start site region 108749
Tssr108750 11 69664467 to 69664488 21 - TSS region transcription start site region 108750
Tssr108751 11 69664500 to 69664517 17 - TSS region transcription start site region 108751
Tssr108752 11 69664778 to 69664930 152 - TSS region transcription start site region 108752
Tssr108753 11 69665058 to 69665120 62 - TSS region transcription start site region 108753
Tssr108754 11 69665297 to 69665320 23 - TSS region transcription start site region 108754
Tssr108755 11 69665357 to 69665365 8 - TSS region transcription start site region 108755
Tssr108756 11 69665384 to 69665395 11 - TSS region transcription start site region 108756
Tssr108757 11 69665575 to 69665586 11 - TSS region transcription start site region 108757
Tssr102512 11 69665601 to 69665636 35 + TSS region transcription start site region 102512
Tssr102513 11 69665637 to 69665674 37 + TSS region transcription start site region 102513
Tssr102514 11 69665682 to 69665704 22 + TSS region transcription start site region 102514
Tssr102515 11 69665711 to 69665842 131 + TSS region transcription start site region 102515
Tssr108758 11 69665818 to 69665825 7 - TSS region transcription start site region 108758
Tssr108759 11 69665836 to 69665843 7 - TSS region transcription start site region 108759
Tssr108760 11 69665892 to 69665905 13 - TSS region transcription start site region 108760
Tssr108761 11 69666065 to 69666076 11 - TSS region transcription start site region 108761
Tssr108762 11 69666078 to 69666149 71 - TSS region transcription start site region 108762
Tssr108763 11 69666162 to 69666169 7 - TSS region transcription start site region 108763
Tssr102516 11 69666472 to 69666493 21 + TSS region transcription start site region 102516
Tssr102517 11 69666502 to 69666515 13 + TSS region transcription start site region 102517
Eif4a1 11 69666936 to 69672423 5487 - protein coding gene eukaryotic translation initiation factor 4A1
Tssr108764 11 69667225 to 69667255 30 - TSS region transcription start site region 108764
Tssr108765 11 69667370 to 69667386 16 - TSS region transcription start site region 108765
Gm24029 11 69667834 to 69667976 142 - snoRNA gene predicted gene, 24029
Gm25835 11 69668852 to 69668995 143 - snoRNA gene predicted gene, 25835
Tssr108766 11 69668991 to 69668996 5 - TSS region transcription start site region 108766
Gm22988 11 69669635 to 69669778 143 - snoRNA gene predicted gene, 22988
Cpgi3141 11 69670916 to 69672763 1847 CpG island CpG island 3141
Tssr108767 11 69671214 to 69671238 24 - TSS region transcription start site region 108767
Tssr108768 11 69671244 to 69671284 40 - TSS region transcription start site region 108768
Tssr102518 11 69671366 to 69671400 34 + TSS region transcription start site region 102518
Tssr108769 11 69672307 to 69672332 25 - TSS region transcription start site region 108769
Tssr108770 11 69672334 to 69672359 25 - TSS region transcription start site region 108770
Tssr108771 11 69672378 to 69672398 20 - TSS region transcription start site region 108771
Tssr108772 11 69672407 to 69672418 11 - TSS region transcription start site region 108772
Senp3 11 69673115 to 69682084 8969 - protein coding gene SUMO/sentrin specific peptidase 3
Tssr108773 11 69680641 to 69680665 24 - TSS region transcription start site region 108773
Cpgi3142 11 69681267 to 69682293 1026 CpG island CpG island 3142
Tssr108774 11 69681793 to 69681804 11 - TSS region transcription start site region 108774
Tssr108775 11 69681822 to 69681856 34 - TSS region transcription start site region 108775
Tssr108776 11 69681870 to 69681896 26 - TSS region transcription start site region 108776
Tssr108777 11 69681903 to 69681953 50 - TSS region transcription start site region 108777
Tssr108778 11 69681959 to 69681981 22 - TSS region transcription start site region 108778
Tssr108779 11 69681994 to 69682005 11 - TSS region transcription start site region 108779
Tssr108780 11 69682070 to 69682079 9 - TSS region transcription start site region 108780
Tnfsf13os 11 69682138 to 69691141 9003 + antisense lncRNA gene tumor necrosis factor (ligand) superfamily, member 13, opposite strand
Tnfsfm13 11 69682577 to 69696098 13521 - protein coding gene tumor necrosis factor (ligand) superfamily, membrane-bound member 13
Tnfsf13 11 69682846 to 69685784 2938 - protein coding gene tumor necrosis factor (ligand) superfamily, member 13
Tssr102519 11 69684323 to 69684335 12 + TSS region transcription start site region 102519
Tssr102520 11 69684355 to 69684384 29 + TSS region transcription start site region 102520
Tssr102521 11 69684396 to 69684411 15 + TSS region transcription start site region 102521
Tssr102522 11 69684489 to 69684507 18 + TSS region transcription start site region 102522
Tssr102523 11 69684551 to 69684562 11 + TSS region transcription start site region 102523
Tssr108781 11 69685275 to 69685335 60 - TSS region transcription start site region 108781
Tssr108782 11 69685337 to 69685348 11 - TSS region transcription start site region 108782
Tssr108783 11 69685520 to 69685536 16 - TSS region transcription start site region 108783
Tssr108784 11 69685537 to 69685565 28 - TSS region transcription start site region 108784
Tssr102524 11 69685937 to 69685950 13 + TSS region transcription start site region 102524
Tnfsf12 11 69686250 to 69695849 9599 - protein coding gene tumor necrosis factor (ligand) superfamily, member 12
Tssr102525 11 69686707 to 69686742 35 + TSS region transcription start site region 102525
Tssr108785 11 69686723 to 69686739 16 - TSS region transcription start site region 108785
Tssr108786 11 69686747 to 69686797 50 - TSS region transcription start site region 108786
Tssr108787 11 69686828 to 69686840 12 - TSS region transcription start site region 108787
Tssr108788 11 69686887 to 69686898 11 - TSS region transcription start site region 108788
Tssr108789 11 69686916 to 69686928 12 - TSS region transcription start site region 108789
Tssr108790 11 69686939 to 69686953 14 - TSS region transcription start site region 108790
Tssr108791 11 69687029 to 69687045 16 - TSS region transcription start site region 108791
Tssr108792 11 69687061 to 69687081 20 - TSS region transcription start site region 108792
Tssr108793 11 69687286 to 69687300 14 - TSS region transcription start site region 108793
Tssr108794 11 69687309 to 69687327 18 - TSS region transcription start site region 108794
Tssr102526 11 69692649 to 69692662 13 + TSS region transcription start site region 102526