Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:69453224-69593228

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sluc36 11 59365791 to 69591873 10226082 QTL susceptibility to lung cancer 36
Dnah2 11 69420807 to 69549108 128301 - protein coding gene dynein, axonemal, heavy chain 2
Dnah2os 11 69448548 to 69453676 5128 + antisense lncRNA gene dynein, axonemal, heavy chain 2, opposite strand
Gm27493 11 69505358 to 69505435 77 - miRNA gene predicted gene, 27493
Tssr108696 11 69523224 to 69523228 4 - TSS region transcription start site region 108696
D11Mit298.5 11 69526353 to 69526478 125 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 298.5
D11Mit298 11 69526464 to 69526662 198 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 298
Cpgi3132 11 69546417 to 69546921 504 CpG island CpG island 3132
Tssr108697 11 69546484 to 69546528 44 - TSS region transcription start site region 108697
Efnb3 11 69554092 to 69560205 6113 - protein coding gene ephrin B3
Tssr108698 11 69554771 to 69554811 40 - TSS region transcription start site region 108698
Tssr108699 11 69555566 to 69555613 47 - TSS region transcription start site region 108699
Tssr108700 11 69555778 to 69555789 11 - TSS region transcription start site region 108700
Tssr108701 11 69555973 to 69556009 36 - TSS region transcription start site region 108701
Cpgi3133 11 69559781 to 69560596 815 CpG island CpG island 3133
Tssr108702 11 69560170 to 69560185 15 - TSS region transcription start site region 108702
Tssr108703 11 69560186 to 69560213 27 - TSS region transcription start site region 108703
Tssr108704 11 69560224 to 69560235 11 - TSS region transcription start site region 108704
Wrap53 11 69561758 to 69580255 18497 - protein coding gene WD repeat containing, antisense to Trp53
Tssr102475 11 69573819 to 69573833 14 + TSS region transcription start site region 102475
Rps27-ps2 11 69573827 to 69574168 341 + pseudogene ribosomal protein S27, pseudogene 2
Cpgi3134 11 69578604 to 69579472 868 CpG island CpG island 3134
Tssr108705 11 69579124 to 69579140 16 - TSS region transcription start site region 108705
Tssr108706 11 69579212 to 69579289 77 - TSS region transcription start site region 108706
Tssr108707 11 69579320 to 69579352 32 - TSS region transcription start site region 108707
Tssr108708 11 69579367 to 69579398 31 - TSS region transcription start site region 108708
Tssr108709 11 69580230 to 69580256 26 - TSS region transcription start site region 108709
Tssr102476 11 69580282 to 69580303 21 + TSS region transcription start site region 102476
Cpgi3135 11 69580305 to 69580881 576 CpG island CpG island 3135
Trp53 11 69580359 to 69591873 11514 + protein coding gene transformation related protein 53
Tssr102477 11 69580366 to 69580382 16 + TSS region transcription start site region 102477
Tssr102478 11 69580385 to 69580388 3 + TSS region transcription start site region 102478
Tssr102479 11 69580392 to 69580419 27 + TSS region transcription start site region 102479
Cpgi3136 11 69581112 to 69581703 591 CpG island CpG island 3136
Tssr108710 11 69581193 to 69581212 19 - TSS region transcription start site region 108710
Tssr102480 11 69586020 to 69586052 32 + TSS region transcription start site region 102480
Tssr102481 11 69587494 to 69587533 39 + TSS region transcription start site region 102481
D11Mit107.1 11 69587647 to 69587756 109 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 107.1
D11Mit107 11 69587697 to 69587984 287 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 107
D11Mit107.2 11 69587812 to 69587961 149 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 107.2
Tssr102482 11 69589663 to 69589683 20 + TSS region transcription start site region 102482
Tssr102483 11 69590660 to 69590668 8 + TSS region transcription start site region 102483
Tssr102484 11 69591413 to 69591423 10 + TSS region transcription start site region 102484
Tssr102485 11 69591440 to 69591474 34 + TSS region transcription start site region 102485
Tssr102486 11 69591490 to 69591508 18 + TSS region transcription start site region 102486
Tssr108711 11 69592084 to 69592091 7 - TSS region transcription start site region 108711