Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:69330769-69352647

16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Kcnab3	11	69326258 to 69333042	6784	+	protein coding gene	potassium voltage-gated channel, shaker-related subfamily, beta member 3
Kcnab3os	11	69329825 to 69332122	2297	-	antisense lncRNA gene	potassium voltage-gated channel, shaker-related subfamily, beta member 3, opposite strand
Tssr102437	11	69331365 to 69331373	8	+	TSS region	transcription start site region 102437
Tssr102438	11	69331437 to 69331451	14	+	TSS region	transcription start site region 102438
Cpgi3119	11	69331996 to 69332478	482		CpG island	CpG island 3119
Tssr108632	11	69332091 to 69332100	9	-	TSS region	transcription start site region 108632
Tssr108633	11	69332106 to 69332128	22	-	TSS region	transcription start site region 108633
Cpgi3120	11	69339952 to 69341401	1449		CpG island	CpG island 3120
Tssr102439	11	69339987 to 69339989	2	+	TSS region	transcription start site region 102439
Tssr102440	11	69340448 to 69340457	9	+	TSS region	transcription start site region 102440
Tssr102441	11	69340751 to 69340756	5	+	TSS region	transcription start site region 102441
Tssr102442	11	69340763 to 69340838	75	+	TSS region	transcription start site region 102442
Rnf227	11	69340769 to 69342647	1878	+	protein coding gene	ring finger protein 227
Chd3	11	69343273 to 69369406	26133	-	protein coding gene	chromodomain helicase DNA binding protein 3
Gm22442	11	69350518 to 69350661	143	-	snoRNA gene	predicted gene, 22442
Tssr108634	11	69350715 to 69350719	4	-	TSS region	transcription start site region 108634