Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:69324682-69414706

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120 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trappc1 11 69323986 to 69325793 1807 + protein coding gene trafficking protein particle complex 1
Tssr102429 11 69325559 to 69325584 25 + TSS region transcription start site region 102429
Cpgi3118 11 69326076 to 69326909 833 CpG island CpG island 3118
Tssr102430 11 69326252 to 69326275 23 + TSS region transcription start site region 102430
Kcnab3 11 69326258 to 69333042 6784 + protein coding gene potassium voltage-gated channel, shaker-related subfamily, beta member 3
Tssr102431 11 69326284 to 69326314 30 + TSS region transcription start site region 102431
Tssr102432 11 69326317 to 69326339 22 + TSS region transcription start site region 102432
Tssr102433 11 69326346 to 69326355 9 + TSS region transcription start site region 102433
Tssr102434 11 69326668 to 69326681 13 + TSS region transcription start site region 102434
Tssr102435 11 69326696 to 69326716 20 + TSS region transcription start site region 102435
Tssr102436 11 69327860 to 69327868 8 + TSS region transcription start site region 102436
Kcnab3os 11 69329825 to 69332122 2297 - antisense lncRNA gene potassium voltage-gated channel, shaker-related subfamily, beta member 3, opposite strand
Tssr102437 11 69331365 to 69331373 8 + TSS region transcription start site region 102437
Tssr102438 11 69331437 to 69331451 14 + TSS region transcription start site region 102438
Cpgi3119 11 69331996 to 69332478 482 CpG island CpG island 3119
Tssr108632 11 69332091 to 69332100 9 - TSS region transcription start site region 108632
Tssr108633 11 69332106 to 69332128 22 - TSS region transcription start site region 108633
Cpgi3120 11 69339952 to 69341401 1449 CpG island CpG island 3120
Tssr102439 11 69339987 to 69339989 2 + TSS region transcription start site region 102439
Tssr102440 11 69340448 to 69340457 9 + TSS region transcription start site region 102440
Tssr102441 11 69340751 to 69340756 5 + TSS region transcription start site region 102441
Tssr102442 11 69340763 to 69340838 75 + TSS region transcription start site region 102442
Rnf227 11 69340769 to 69342647 1878 + protein coding gene ring finger protein 227
Chd3 11 69343273 to 69369406 26133 - protein coding gene chromodomain helicase DNA binding protein 3
Gm22442 11 69350518 to 69350661 143 - snoRNA gene predicted gene, 22442
Tssr108634 11 69350715 to 69350719 4 - TSS region transcription start site region 108634
Tssr102443 11 69360625 to 69360673 48 + TSS region transcription start site region 102443
Tssr102444 11 69364010 to 69364041 31 + TSS region transcription start site region 102444
Tssr108635 11 69364496 to 69364510 14 - TSS region transcription start site region 108635
Tssr108636 11 69364930 to 69364983 53 - TSS region transcription start site region 108636
Cpgi3121 11 69366065 to 69366370 305 CpG island CpG island 3121
Tssr108637 11 69366459 to 69366470 11 - TSS region transcription start site region 108637
Tssr108638 11 69368050 to 69368093 43 - TSS region transcription start site region 108638
Cpgi3122 11 69368074 to 69369549 1475 CpG island CpG island 3122
Tssr102445 11 69368289 to 69368300 11 + TSS region transcription start site region 102445
Tssr102446 11 69368316 to 69368326 10 + TSS region transcription start site region 102446
Tssr102447 11 69368332 to 69368348 16 + TSS region transcription start site region 102447
Tssr3542 11 69368850 to 69368874 24 + TSS region transcription start site region 3542
Tssr102448 11 69368878 to 69368901 23 + TSS region transcription start site region 102448
Tssr108639 11 69369236 to 69369247 11 - TSS region transcription start site region 108639
Tssr108640 11 69369346 to 69369366 20 - TSS region transcription start site region 108640
Tssr108641 11 69369377 to 69369415 38 - TSS region transcription start site region 108641
Gm32483 11 69369559 to 69374316 4757 + lncRNA gene predicted gene, 32483
Tssr108642 11 69369682 to 69369706 24 - TSS region transcription start site region 108642
Tssr108643 11 69369799 to 69369853 54 - TSS region transcription start site region 108643
Tssr108644 11 69370150 to 69370182 32 - TSS region transcription start site region 108644
Tssr102449 11 69373754 to 69373796 42 + TSS region transcription start site region 102449
Cyb5d1 11 69391925 to 69395631 3706 - protein coding gene cytochrome b5 domain containing 1
Cpgi3123 11 69394778 to 69395107 329 CpG island CpG island 3123
Tssr108645 11 69395135 to 69395139 4 - TSS region transcription start site region 108645
Tssr108646 11 69395432 to 69395478 46 - TSS region transcription start site region 108646
Cpgi3124 11 69395439 to 69396419 980 CpG island CpG island 3124
Tssr108647 11 69395663 to 69395712 49 - TSS region transcription start site region 108647
Tssr102450 11 69395747 to 69395754 7 + TSS region transcription start site region 102450
Tssr102451 11 69395785 to 69395828 43 + TSS region transcription start site region 102451
Naa38 11 69395791 to 69396671 880 + protein coding gene N(alpha)-acetyltransferase 38, NatC auxiliary subunit
Tssr102452 11 69395829 to 69395862 33 + TSS region transcription start site region 102452
Tssr102453 11 69396107 to 69396180 73 + TSS region transcription start site region 102453
Tmem88 11 69396519 to 69398234 1715 - protein coding gene transmembrane protein 88
Cpgi3125 11 69397612 to 69398289 677 CpG island CpG island 3125
Tssr108648 11 69398226 to 69398243 17 - TSS region transcription start site region 108648
Kdm6b 11 69398508 to 69413675 15167 - protein coding gene KDM1 lysine (K)-specific demethylase 6B
Tssr108649 11 69398945 to 69398999 54 - TSS region transcription start site region 108649
Tssr108650 11 69399177 to 69399192 15 - TSS region transcription start site region 108650
Tssr108651 11 69399307 to 69399313 6 - TSS region transcription start site region 108651
Tssr108652 11 69399320 to 69399338 18 - TSS region transcription start site region 108652
Cpgi3126 11 69399396 to 69400259 863 CpG island CpG island 3126
Tssr108653 11 69399421 to 69399445 24 - TSS region transcription start site region 108653
Tssr108654 11 69399602 to 69399606 4 - TSS region transcription start site region 108654
Cpgi3127 11 69401269 to 69401620 351 CpG island CpG island 3127
Tssr108655 11 69401338 to 69401367 29 - TSS region transcription start site region 108655
Kdm6bos 11 69401513 to 69402700 1187 + antisense lncRNA gene KDM1 lysine (K)-specific demethylase 6B, opposite strand
Tssr108656 11 69404972 to 69404996 24 - TSS region transcription start site region 108656
Tssr102454 11 69405178 to 69405195 17 + TSS region transcription start site region 102454
Tssr108657 11 69405231 to 69405259 28 - TSS region transcription start site region 108657
Tssr108658 11 69405268 to 69405286 18 - TSS region transcription start site region 108658
Tssr108659 11 69405442 to 69405461 19 - TSS region transcription start site region 108659
Tssr108660 11 69405873 to 69405911 38 - TSS region transcription start site region 108660
Tssr108661 11 69406755 to 69406770 15 - TSS region transcription start site region 108661
Tssr102455 11 69406853 to 69406878 25 + TSS region transcription start site region 102455
Tssr108662 11 69407606 to 69407620 14 - TSS region transcription start site region 108662
Tssr108663 11 69407637 to 69407649 12 - TSS region transcription start site region 108663
Tssr108664 11 69407813 to 69407831 18 - TSS region transcription start site region 108664
Cpgi3128 11 69408519 to 69411903 3384 CpG island CpG island 3128
Tssr108665 11 69408558 to 69408562 4 - TSS region transcription start site region 108665
Tssr3543 11 69408680 to 69408724 44 - TSS region transcription start site region 3543
Tssr102456 11 69408911 to 69408944 33 + TSS region transcription start site region 102456
Tssr108666 11 69409146 to 69409160 14 - TSS region transcription start site region 108666
Tssr102457 11 69409281 to 69409304 23 + TSS region transcription start site region 102457
Tssr108667 11 69409392 to 69409411 19 - TSS region transcription start site region 108667
Tssr108668 11 69409413 to 69409422 9 - TSS region transcription start site region 108668
Tssr108669 11 69409428 to 69409445 17 - TSS region transcription start site region 108669
Tssr108670 11 69409547 to 69409569 22 - TSS region transcription start site region 108670
Tssr102458 11 69409674 to 69409689 15 + TSS region transcription start site region 102458
Tssr102459 11 69409694 to 69409720 26 + TSS region transcription start site region 102459
Tssr102460 11 69409727 to 69409745 18 + TSS region transcription start site region 102460
Tssr102461 11 69409770 to 69409779 9 + TSS region transcription start site region 102461
Tssr102462 11 69409798 to 69409812 14 + TSS region transcription start site region 102462
Tssr108671 11 69409884 to 69409906 22 - TSS region transcription start site region 108671
Tssr108672 11 69410368 to 69410380 12 - TSS region transcription start site region 108672
Tssr108673 11 69410396 to 69410432 36 - TSS region transcription start site region 108673
Tssr108674 11 69410440 to 69410453 13 - TSS region transcription start site region 108674
Tssr102463 11 69410551 to 69410582 31 + TSS region transcription start site region 102463
Tssr108675 11 69410607 to 69410616 9 - TSS region transcription start site region 108675
Tssr108676 11 69410652 to 69410667 15 - TSS region transcription start site region 108676
Tssr108677 11 69410696 to 69410707 11 - TSS region transcription start site region 108677
Tssr108678 11 69410712 to 69410736 24 - TSS region transcription start site region 108678
Tssr102464 11 69410825 to 69410854 29 + TSS region transcription start site region 102464
Tssr102465 11 69410944 to 69410975 31 + TSS region transcription start site region 102465
Tssr108679 11 69411011 to 69411041 30 - TSS region transcription start site region 108679
Tssr102466 11 69411101 to 69411116 15 + TSS region transcription start site region 102466
Tssr102467 11 69411319 to 69411342 23 + TSS region transcription start site region 102467
Tssr102468 11 69411355 to 69411383 28 + TSS region transcription start site region 102468
Tssr102469 11 69411397 to 69411412 15 + TSS region transcription start site region 102469
Tssr108680 11 69411665 to 69411678 13 - TSS region transcription start site region 108680
Tssr108681 11 69411696 to 69411721 25 - TSS region transcription start site region 108681
Tssr108682 11 69411739 to 69411754 15 - TSS region transcription start site region 108682
Tssr102470 11 69411965 to 69411986 21 + TSS region transcription start site region 102470
Tssr108683 11 69413257 to 69413298 41 - TSS region transcription start site region 108683
Tssr108684 11 69414106 to 69414112 6 - TSS region transcription start site region 108684