MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:69152298-69242731

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr102419	11	69156888 to 69156901	13	+	TSS region	transcription start site region 102419
Tssr102420	11	69156913 to 69156916	3	+	TSS region	transcription start site region 102420
Cpgi3111	11	69156939 to 69157335	396		CpG island	CpG island 3111
Tssr102421	11	69157032 to 69157051	19	+	TSS region	transcription start site region 102421
Tssr102422	11	69157053 to 69157061	8	+	TSS region	transcription start site region 102422
Tssr102423	11	69157063 to 69157081	18	+	TSS region	transcription start site region 102423
Alox12b	11	69157072 to 69169791	12719	+	protein coding gene	arachidonate 12-lipoxygenase, 12R type
Tssr102424	11	69157084 to 69157110	26	+	TSS region	transcription start site region 102424
Alox8	11	69183932 to 69197843	13911	-	protein coding gene	arachidonate 8-lipoxygenase
Cpgi3112	11	69197298 to 69197731	433		CpG island	CpG island 3112
Tssr108627	11	69197445 to 69197491	46	-	TSS region	transcription start site region 108627
Tssr108628	11	69197834 to 69197838	4	-	TSS region	transcription start site region 108628
Gucy2e	11	69218117 to 69237036	18919	-	protein coding gene	guanylate cyclase 2e
Cpgi3113	11	69223556 to 69223878	322		CpG island	CpG island 3113
Cpgi3114	11	69224133 to 69224341	208		CpG island	CpG island 3114
Cpgi3115	11	69227965 to 69228219	254		CpG island	CpG island 3115
Cpgi3116	11	69235408 to 69236717	1309		CpG island	CpG island 3116
Tssr108629	11	69237029 to 69237044	15	-	TSS region	transcription start site region 108629
Gm23194	11	69240599 to 69240703	104	+	snRNA gene	predicted gene, 23194