Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:69133117-69322036

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Aloxe3 11 69125896 to 69149115 23219 + protein coding gene arachidonate lipoxygenase 3
Cpgi3109 11 69133997 to 69134661 664 CpG island CpG island 3109
Tssr102417 11 69134135 to 69134164 29 + TSS region transcription start site region 102417
Cpgi3110 11 69135001 to 69135233 232 CpG island CpG island 3110
Tssr102418 11 69142562 to 69142566 4 + TSS region transcription start site region 102418
Tssr102419 11 69156888 to 69156901 13 + TSS region transcription start site region 102419
Tssr102420 11 69156913 to 69156916 3 + TSS region transcription start site region 102420
Cpgi3111 11 69156939 to 69157335 396 CpG island CpG island 3111
Tssr102421 11 69157032 to 69157051 19 + TSS region transcription start site region 102421
Tssr102422 11 69157053 to 69157061 8 + TSS region transcription start site region 102422
Tssr102423 11 69157063 to 69157081 18 + TSS region transcription start site region 102423
Alox12b 11 69157072 to 69169791 12719 + protein coding gene arachidonate 12-lipoxygenase, 12R type
Tssr102424 11 69157084 to 69157110 26 + TSS region transcription start site region 102424
Alox8 11 69183932 to 69197843 13911 - protein coding gene arachidonate 8-lipoxygenase
Cpgi3112 11 69197298 to 69197731 433 CpG island CpG island 3112
Tssr108627 11 69197445 to 69197491 46 - TSS region transcription start site region 108627
Tssr108628 11 69197834 to 69197838 4 - TSS region transcription start site region 108628
Gucy2e 11 69218117 to 69237036 18919 - protein coding gene guanylate cyclase 2e
Cpgi3113 11 69223556 to 69223878 322 CpG island CpG island 3113
Cpgi3114 11 69224133 to 69224341 208 CpG island CpG island 3114
Cpgi3115 11 69227965 to 69228219 254 CpG island CpG island 3115
Cpgi3116 11 69235408 to 69236717 1309 CpG island CpG island 3116
Tssr108629 11 69237029 to 69237044 15 - TSS region transcription start site region 108629
Gm23194 11 69240599 to 69240703 104 + snRNA gene predicted gene, 23194
Gm40039 11 69249929 to 69262080 12151 - lncRNA gene predicted gene, 40039
D11Mit278.2 11 69287543 to 69287657 114 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 278.2
D11Mit278 11 69287607 to 69287720 113 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 278
D11Mit278.1 11 69287723 to 69287869 146 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 278.1
Cntrobos 11 69294151 to 69295477 1326 + antisense lncRNA gene centrobin, centrosomal BRCA2 interacting protein, opposite strand
Cntrob 11 69299487 to 69323775 24288 - protein coding gene centrobin, centrosomal BRCA2 interacting protein