Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:69100859-69121269

12 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Per1	11	69095217 to 69109960	14743	+	protein coding gene	period circadian clock 1
Tssr102411	11	69101020 to 69101027	7	+	TSS region	transcription start site region 102411
Tssr102412	11	69103365 to 69103383	18	+	TSS region	transcription start site region 102412
Tssr102413	11	69103647 to 69103691	44	+	TSS region	transcription start site region 102413
n-TTagt5	11	69110465 to 69110538	73	+	tRNA gene	nuclear encoded tRNA threonine 5 (anticodon AGT)
Cpgi3105	11	69110859 to 69111269	410		CpG island	CpG island 3105
n-TScga3	11	69110919 to 69111000	81	+	tRNA gene	nuclear encoded tRNA serine 14 (anticodon CGA)
Cpgi3106	11	69117749 to 69118305	556		CpG island	CpG island 3106
n-TGgcc5	11	69118794 to 69118864	70	-	tRNA gene	nuclear encoded tRNA glycine 5 (anticodon GCC)
9130213A22Rik	11	69120054 to 69122589	2535	-	unclassified gene	RIKEN cDNA 9130213A22 gene
Hes7	11	69120404 to 69124055	3651	+	protein coding gene	hes family bHLH transcription factor 7
Cpgi3107	11	69120972 to 69123591	2619		CpG island	CpG island 3107