Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:69066416-69116423

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3098 11 69066073 to 69066819 746 CpG island CpG island 3098
Cpgi3099 11 69070286 to 69071272 986 CpG island CpG island 3099
Tssr108620 11 69070696 to 69070721 25 - TSS region transcription start site region 108620
Tssr108621 11 69070725 to 69070757 32 - TSS region transcription start site region 108621
Tssr102373 11 69070790 to 69070856 66 + TSS region transcription start site region 102373
Tmem107 11 69070809 to 69073293 2484 + protein coding gene transmembrane protein 107
Tssr102374 11 69070857 to 69070880 23 + TSS region transcription start site region 102374
Tssr102375 11 69070922 to 69070933 11 + TSS region transcription start site region 102375
Tssr102376 11 69073424 to 69073429 5 + TSS region transcription start site region 102376
Snord118 11 69073427 to 69073561 134 + snoRNA gene small nucleolar RNA, C/D box 118
Gm12306 11 69074490 to 69074660 170 + pseudogene predicted gene 12306
Gm25371 11 69075015 to 69075115 100 + snRNA gene predicted gene, 25371
Cpgi3100 11 69088118 to 69089651 1533 CpG island CpG island 3100
Tssr102377 11 69088482 to 69088493 11 + TSS region transcription start site region 102377
Tssr102378 11 69088515 to 69088553 38 + TSS region transcription start site region 102378
Vamp2 11 69088528 to 69092381 3853 + protein coding gene vesicle-associated membrane protein 2
Tssr3539 11 69088606 to 69088607 1 + TSS region transcription start site region 3539
Tssr102379 11 69089141 to 69089162 21 + TSS region transcription start site region 102379
Tssr102380 11 69089743 to 69089764 21 + TSS region transcription start site region 102380
Tssr102381 11 69089768 to 69089812 44 + TSS region transcription start site region 102381
Tssr102382 11 69089956 to 69089997 41 + TSS region transcription start site region 102382
Tssr102383 11 69090675 to 69090678 3 + TSS region transcription start site region 102383
Tssr102384 11 69090692 to 69090757 65 + TSS region transcription start site region 102384
Tssr102385 11 69090764 to 69090817 53 + TSS region transcription start site region 102385
Tssr102386 11 69090830 to 69090841 11 + TSS region transcription start site region 102386
Tssr102387 11 69090843 to 69090859 16 + TSS region transcription start site region 102387
Tssr102388 11 69090860 to 69090872 12 + TSS region transcription start site region 102388
Tssr102389 11 69090876 to 69090897 21 + TSS region transcription start site region 102389
Tssr102390 11 69090903 to 69090929 26 + TSS region transcription start site region 102390
Tssr102391 11 69090941 to 69090950 9 + TSS region transcription start site region 102391
Tssr102392 11 69090989 to 69091009 20 + TSS region transcription start site region 102392
Tssr102393 11 69091021 to 69091038 17 + TSS region transcription start site region 102393
Tssr102394 11 69091055 to 69091066 11 + TSS region transcription start site region 102394
Tssr102395 11 69091109 to 69091116 7 + TSS region transcription start site region 102395
Tssr102396 11 69091128 to 69091133 5 + TSS region transcription start site region 102396
Tssr102397 11 69091173 to 69091178 5 + TSS region transcription start site region 102397
Tssr3540 11 69091222 to 69091231 9 + TSS region transcription start site region 3540
Tssr102398 11 69091416 to 69091423 7 + TSS region transcription start site region 102398
Tssr102399 11 69091445 to 69091450 5 + TSS region transcription start site region 102399
Tssr3541 11 69091459 to 69091466 7 + TSS region transcription start site region 3541
Tssr102400 11 69091488 to 69091498 10 + TSS region transcription start site region 102400
Tssr102401 11 69091508 to 69091521 13 + TSS region transcription start site region 102401
Cpgi3101 11 69094647 to 69095757 1110 CpG island CpG island 3101
Tssr108622 11 69094715 to 69094726 11 - TSS region transcription start site region 108622
Per1 11 69095217 to 69109960 14743 + protein coding gene period circadian clock 1
Tssr102402 11 69095237 to 69095289 52 + TSS region transcription start site region 102402
Tssr102403 11 69096570 to 69096574 4 + TSS region transcription start site region 102403
Cpgi3102 11 69096962 to 69097272 310 CpG island CpG island 3102
Tssr102404 11 69097222 to 69097253 31 + TSS region transcription start site region 102404
Tssr102405 11 69097731 to 69097744 13 + TSS region transcription start site region 102405
Tssr102406 11 69097762 to 69097773 11 + TSS region transcription start site region 102406
Tssr108623 11 69098168 to 69098207 39 - TSS region transcription start site region 108623
Tssr108624 11 69098588 to 69098629 41 - TSS region transcription start site region 108624
Cpgi3103 11 69098721 to 69099437 716 CpG island CpG island 3103
Tssr102407 11 69098723 to 69098728 5 + TSS region transcription start site region 102407
Tssr108625 11 69098747 to 69098752 5 - TSS region transcription start site region 108625
Tssr102408 11 69098915 to 69098936 21 + TSS region transcription start site region 102408
Tssr102409 11 69098937 to 69098985 48 + TSS region transcription start site region 102409
Tssr102410 11 69099034 to 69099053 19 + TSS region transcription start site region 102410
Cpgi3104 11 69099887 to 69100327 440 CpG island CpG island 3104
Tssr108626 11 69099913 to 69099931 18 - TSS region transcription start site region 108626
Tssr102411 11 69101020 to 69101027 7 + TSS region transcription start site region 102411
Tssr102412 11 69103365 to 69103383 18 + TSS region transcription start site region 102412
Tssr102413 11 69103647 to 69103691 44 + TSS region transcription start site region 102413
n-TTagt5 11 69110465 to 69110538 73 + tRNA gene nuclear encoded tRNA threonine 5 (anticodon AGT)
Cpgi3105 11 69110859 to 69111269 410 CpG island CpG island 3105
n-TScga3 11 69110919 to 69111000 81 + tRNA gene nuclear encoded tRNA serine 14 (anticodon CGA)