Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:68899379-69009686

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3084 11 68901064 to 68901962 898 CpG island CpG island 3084
Tssr102348 11 68901517 to 68901529 12 + TSS region transcription start site region 102348
Tssr102349 11 68901538 to 68901633 95 + TSS region transcription start site region 102349
Rpl26 11 68901566 to 68904534 2968 + protein coding gene ribosomal protein L26
Tssr102350 11 68901643 to 68901657 14 + TSS region transcription start site region 102350
Gm22608 11 68908020 to 68908122 102 + snRNA gene predicted gene, 22608
Odf4 11 68921835 to 68927081 5246 - protein coding gene outer dense fiber of sperm tails 4
Tssr108602 11 68927061 to 68927101 40 - TSS region transcription start site region 108602
Tssr108603 11 68930060 to 68930071 11 - TSS region transcription start site region 108603
D11Ertd518e 11 68941491 to 68941736 245 DNA segment DNA segment, Chr 11, ERATO Doi 518, expressed
Arhgef15 11 68943155 to 68957480 14325 - protein coding gene Rho guanine nucleotide exchange factor (GEF) 15
Cpgi3085 11 68947298 to 68947585 287 CpG island CpG island 3085
Tssr108604 11 68947373 to 68947412 39 - TSS region transcription start site region 108604
Tssr108605 11 68947540 to 68947574 34 - TSS region transcription start site region 108605
Cpgi3086 11 68954379 to 68954686 307 CpG island CpG island 3086
Tssr108606 11 68956195 to 68956229 34 - TSS region transcription start site region 108606
Tssr108607 11 68956873 to 68956909 36 - TSS region transcription start site region 108607
Gm32273 11 68956946 to 68962325 5379 + lncRNA gene predicted gene, 32273
Tssr102351 11 68956975 to 68956994 19 + TSS region transcription start site region 102351
Tssr108608 11 68957445 to 68957485 40 - TSS region transcription start site region 108608
Slc25a35 11 68967607 to 68972516 4909 + protein coding gene solute carrier family 25, member 35
Tssr102352 11 68967641 to 68967652 11 + TSS region transcription start site region 102352
Cpgi3087 11 68967662 to 68968304 642 CpG island CpG island 3087
Tssr102353 11 68968107 to 68968175 68 + TSS region transcription start site region 102353
Tssr102354 11 68968179 to 68968186 7 + TSS region transcription start site region 102354
Rangrf 11 68972484 to 68975185 2701 - protein coding gene RAN guanine nucleotide release factor
Tssr108609 11 68973278 to 68973292 14 - TSS region transcription start site region 108609
Cpgi3088 11 68973300 to 68974028 728 CpG island CpG island 3088
Tssr108610 11 68973332 to 68973353 21 - TSS region transcription start site region 108610
Tssr108611 11 68973364 to 68973382 18 - TSS region transcription start site region 108611
Tssr108612 11 68973840 to 68973864 24 - TSS region transcription start site region 108612
Gm32384 11 68977004 to 68983568 6564 - lncRNA gene predicted gene, 32384
Pfas 11 68985701 to 69008460 22759 - protein coding gene phosphoribosylformylglycinamidine synthase (FGAR amidotransferase)
Cpgi3089 11 68988277 to 68988647 370 CpG island CpG island 3089
Mir3062 11 68990574 to 68990678 104 - miRNA gene microRNA 3062
Gm25819 11 68996002 to 68996085 83 + snRNA gene predicted gene, 25819
Cpgi3090 11 69008202 to 69008715 513 CpG island CpG island 3090
Tssr108613 11 69008422 to 69008477 55 - TSS region transcription start site region 108613