Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:68897540-68997574

36 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi3084	11	68901064 to 68901962	898		CpG island	CpG island 3084
Tssr102348	11	68901517 to 68901529	12	+	TSS region	transcription start site region 102348
Tssr102349	11	68901538 to 68901633	95	+	TSS region	transcription start site region 102349
Rpl26	11	68901566 to 68904534	2968	+	protein coding gene	ribosomal protein L26
Tssr102350	11	68901643 to 68901657	14	+	TSS region	transcription start site region 102350
Gm22608	11	68908020 to 68908122	102	+	snRNA gene	predicted gene, 22608
Odf4	11	68921835 to 68927081	5246	-	protein coding gene	outer dense fiber of sperm tails 4
Tssr108602	11	68927061 to 68927101	40	-	TSS region	transcription start site region 108602
Tssr108603	11	68930060 to 68930071	11	-	TSS region	transcription start site region 108603
D11Ertd518e	11	68941491 to 68941736	245		DNA segment	DNA segment, Chr 11, ERATO Doi 518, expressed
Arhgef15	11	68943155 to 68957480	14325	-	protein coding gene	Rho guanine nucleotide exchange factor (GEF) 15
Cpgi3085	11	68947298 to 68947585	287		CpG island	CpG island 3085
Tssr108604	11	68947373 to 68947412	39	-	TSS region	transcription start site region 108604
Tssr108605	11	68947540 to 68947574	34	-	TSS region	transcription start site region 108605
Cpgi3086	11	68954379 to 68954686	307		CpG island	CpG island 3086
Tssr108606	11	68956195 to 68956229	34	-	TSS region	transcription start site region 108606
Tssr108607	11	68956873 to 68956909	36	-	TSS region	transcription start site region 108607
Gm32273	11	68956946 to 68962325	5379	+	lncRNA gene	predicted gene, 32273
Tssr102351	11	68956975 to 68956994	19	+	TSS region	transcription start site region 102351
Tssr108608	11	68957445 to 68957485	40	-	TSS region	transcription start site region 108608
Slc25a35	11	68967607 to 68972516	4909	+	protein coding gene	solute carrier family 25, member 35
Tssr102352	11	68967641 to 68967652	11	+	TSS region	transcription start site region 102352
Cpgi3087	11	68967662 to 68968304	642		CpG island	CpG island 3087
Tssr102353	11	68968107 to 68968175	68	+	TSS region	transcription start site region 102353
Tssr102354	11	68968179 to 68968186	7	+	TSS region	transcription start site region 102354
Rangrf	11	68972484 to 68975185	2701	-	protein coding gene	RAN guanine nucleotide release factor
Tssr108609	11	68973278 to 68973292	14	-	TSS region	transcription start site region 108609
Cpgi3088	11	68973300 to 68974028	728		CpG island	CpG island 3088
Tssr108610	11	68973332 to 68973353	21	-	TSS region	transcription start site region 108610
Tssr108611	11	68973364 to 68973382	18	-	TSS region	transcription start site region 108611
Tssr108612	11	68973840 to 68973864	24	-	TSS region	transcription start site region 108612
Gm32384	11	68977004 to 68983568	6564	-	lncRNA gene	predicted gene, 32384
Pfas	11	68985701 to 69008460	22759	-	protein coding gene	phosphoribosylformylglycinamidine synthase (FGAR amidotransferase)
Cpgi3089	11	68988277 to 68988647	370		CpG island	CpG island 3089
Mir3062	11	68990574 to 68990678	104	-	miRNA gene	microRNA 3062
Gm25819	11	68996002 to 68996085	83	+	snRNA gene	predicted gene, 25819