Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:68858020-68958122

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr108595 11 68860005 to 68860017 12 - TSS region transcription start site region 108595
Tssr108596 11 68860022 to 68860063 41 - TSS region transcription start site region 108596
Tssr108597 11 68863878 to 68863883 5 - TSS region transcription start site region 108597
Tssr108598 11 68863981 to 68863988 7 - TSS region transcription start site region 108598
Tssr102342 11 68864160 to 68864199 39 + TSS region transcription start site region 102342
Tssr3536 11 68864761 to 68864762 1 + TSS region transcription start site region 3536
Tssr108599 11 68871848 to 68871857 9 - TSS region transcription start site region 108599
Tssr108600 11 68871859 to 68871874 15 - TSS region transcription start site region 108600
Tssr108601 11 68871883 to 68871927 44 - TSS region transcription start site region 108601
Tssr102343 11 68872032 to 68872043 11 + TSS region transcription start site region 102343
Tssr3537 11 68872045 to 68872068 23 + TSS region transcription start site region 3537
Tssr3538 11 68872098 to 68872107 9 + TSS region transcription start site region 3538
Tssr102344 11 68888517 to 68888523 6 + TSS region transcription start site region 102344
Tssr102345 11 68888545 to 68888562 17 + TSS region transcription start site region 102345
Rnf222 11 68888553 to 68895777 7224 + protein coding gene ring finger protein 222
Tssr102346 11 68888578 to 68888588 10 + TSS region transcription start site region 102346
Tssr102347 11 68888594 to 68888605 11 + TSS region transcription start site region 102347
Cpgi3083 11 68892615 to 68893214 599 CpG island CpG island 3083
Cpgi3084 11 68901064 to 68901962 898 CpG island CpG island 3084
Tssr102348 11 68901517 to 68901529 12 + TSS region transcription start site region 102348
Tssr102349 11 68901538 to 68901633 95 + TSS region transcription start site region 102349
Rpl26 11 68901566 to 68904534 2968 + protein coding gene ribosomal protein L26
Tssr102350 11 68901643 to 68901657 14 + TSS region transcription start site region 102350
Gm22608 11 68908020 to 68908122 102 + snRNA gene predicted gene, 22608
Odf4 11 68921835 to 68927081 5246 - protein coding gene outer dense fiber of sperm tails 4
Tssr108602 11 68927061 to 68927101 40 - TSS region transcription start site region 108602
Tssr108603 11 68930060 to 68930071 11 - TSS region transcription start site region 108603
D11Ertd518e 11 68941491 to 68941736 245 DNA segment DNA segment, Chr 11, ERATO Doi 518, expressed
Arhgef15 11 68943155 to 68957480 14325 - protein coding gene Rho guanine nucleotide exchange factor (GEF) 15
Cpgi3085 11 68947298 to 68947585 287 CpG island CpG island 3085
Tssr108604 11 68947373 to 68947412 39 - TSS region transcription start site region 108604
Tssr108605 11 68947540 to 68947574 34 - TSS region transcription start site region 108605
Cpgi3086 11 68954379 to 68954686 307 CpG island CpG island 3086
Tssr108606 11 68956195 to 68956229 34 - TSS region transcription start site region 108606
Tssr108607 11 68956873 to 68956909 36 - TSS region transcription start site region 108607
Gm32273 11 68956946 to 68962325 5379 + lncRNA gene predicted gene, 32273
Tssr102351 11 68956975 to 68956994 19 + TSS region transcription start site region 102351
Tssr108608 11 68957445 to 68957485 40 - TSS region transcription start site region 108608