Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:68554506-68854507

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scfq3 11 12318637 to 68609504 56290867 QTL subcutaneous fat pad weight QTL 3
Egq4 11 12318637 to 68609504 56290867 QTL early growth QTL 4
Kidpq1 11 12318637 to 68609504 56290867 QTL kidney weight percentage QTL 1
Epfq4 11 12318637 to 68609504 56290867 QTL epididymal fat pad weight QTL 4
W6q3 11 12318637 to 68609504 56290867 QTL weight 6 weeks QTL 3
Lgaq1 11 12318637 to 68609504 56290867 QTL late growth adjusted QTL 1
Lgq1 11 12318637 to 68609504 56290867 QTL late growth QTL 1
Orq2 11 12318637 to 68609504 56290867 QTL ovulation rate QTL 2
Tailq1 11 12318637 to 68609504 56290867 QTL tail length QTL 1
W10q2 11 12318637 to 68609504 56290867 QTL weight 10 weeks QTL 2
W3q4 11 12318637 to 68609504 56290867 QTL weight 3 weeks QTL 4
Eae6 11 17831966 to 68609504 50777538 QTL experimental allergic encephalomyelitis susceptibility 6
Ltxs2 11 63151287 to 68609504 5458217 QTL lethal factor toxin susceptibility 2
Cpgi3079 11 68555915 to 68556541 626 CpG island CpG island 3079
Mfsd6l 11 68556186 to 68558245 2059 + protein coding gene major facilitator superfamily domain containing 6-like
Tssr102325 11 68556309 to 68556319 10 + TSS region transcription start site region 102325
D11Mit28 11 68560360 to 68560508 148 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 28
Gm40036 11 68562235 to 68572414 10179 + lncRNA gene predicted gene, 40036
Ccdc42os 11 68583270 to 68585621 2351 - antisense lncRNA gene coiled-coil domain containing 42, opposite strand
Tssr102326 11 68586986 to 68587030 44 + TSS region transcription start site region 102326
Ccdc42 11 68587037 to 68597954 10917 + protein coding gene coiled-coil domain containing 42
Tssr102327 11 68594053 to 68594064 11 + TSS region transcription start site region 102327
D11Mit4 11 68609257 to 68609504 247 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 4
Tssr102328 11 68614218 to 68614221 3 + TSS region transcription start site region 102328
Tssr102329 11 68623873 to 68623876 3 + TSS region transcription start site region 102329
Cpgi3080 11 68691294 to 68692452 1158 CpG island CpG island 3080
Tssr108586 11 68691726 to 68691754 28 - TSS region transcription start site region 108586
Tssr102330 11 68691906 to 68691911 5 + TSS region transcription start site region 102330
Myh10 11 68691915 to 68816625 124710 + protein coding gene myosin, heavy polypeptide 10, non-muscle
Tssr102331 11 68691926 to 68691944 18 + TSS region transcription start site region 102331
Tssr102332 11 68691946 to 68691979 33 + TSS region transcription start site region 102332
Tssr102333 11 68692070 to 68692086 16 + TSS region transcription start site region 102333
Tssr102334 11 68692090 to 68692095 5 + TSS region transcription start site region 102334
Tssr102335 11 68692097 to 68692126 29 + TSS region transcription start site region 102335
Tssr102336 11 68692131 to 68692138 7 + TSS region transcription start site region 102336
Cpgi3081 11 68692516 to 68693173 657 CpG island CpG island 3081
Tssr102337 11 68704506 to 68704507 1 + TSS region transcription start site region 102337
Tssr102338 11 68767989 to 68768018 29 + TSS region transcription start site region 102338
Ndel1 11 68821434 to 68853131 31697 - protein coding gene nudE neurodevelopment protein 1 like 1
Tssr108587 11 68825071 to 68825074 3 - TSS region transcription start site region 108587
Tssr108588 11 68825318 to 68825320 2 - TSS region transcription start site region 108588
Tssr108589 11 68838745 to 68838752 7 - TSS region transcription start site region 108589
Cpgi3082 11 68852382 to 68853420 1038 CpG island CpG island 3082
Tssr108590 11 68852983 to 68853003 20 - TSS region transcription start site region 108590
Tssr108591 11 68853019 to 68853101 82 - TSS region transcription start site region 108591
Tssr108592 11 68853119 to 68853140 21 - TSS region transcription start site region 108592
Tssr102339 11 68853295 to 68853340 45 + TSS region transcription start site region 102339
Tssr102340 11 68853373 to 68853388 15 + TSS region transcription start site region 102340
Tssr102341 11 68853395 to 68853402 7 + TSS region transcription start site region 102341
Tssr108593 11 68854053 to 68854056 3 - TSS region transcription start site region 108593
Tssr3535 11 68854150 to 68854179 29 - TSS region transcription start site region 3535
Tssr108594 11 68854284 to 68854299 15 - TSS region transcription start site region 108594