Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:68496688-68606811

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pik3r5 11 68432125 to 68497849 65724 + protein coding gene phosphoinositide-3-kinase regulatory subunit 5
Tssr102319 11 68496684 to 68496703 19 + TSS region transcription start site region 102319
Tssr102320 11 68496707 to 68496720 13 + TSS region transcription start site region 102320
D11Mit1000 11 68500726 to 68500869 143 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 1000
Pik3r6 11 68503019 to 68552698 49679 + protein coding gene phosphoinositide-3-kinase regulatory subunit 5
Tssr102321 11 68503069 to 68503076 7 + TSS region transcription start site region 102321
Tssr102322 11 68503081 to 68503113 32 + TSS region transcription start site region 102322
Cpgi3078 11 68531421 to 68531581 160 CpG island CpG island 3078
Tssr102323 11 68534205 to 68534238 33 + TSS region transcription start site region 102323
Tssr102324 11 68539602 to 68539627 25 + TSS region transcription start site region 102324
D11Mit277 11 68551688 to 68551811 123 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 277
Cpgi3079 11 68555915 to 68556541 626 CpG island CpG island 3079
Mfsd6l 11 68556186 to 68558245 2059 + protein coding gene major facilitator superfamily domain containing 6-like
Tssr102325 11 68556309 to 68556319 10 + TSS region transcription start site region 102325
D11Mit28 11 68560360 to 68560508 148 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 28
Gm40036 11 68562235 to 68572414 10179 + lncRNA gene predicted gene, 40036
Ccdc42os 11 68583270 to 68585621 2351 - antisense lncRNA gene coiled-coil domain containing 42, opposite strand
Tssr102326 11 68586986 to 68587030 44 + TSS region transcription start site region 102326
Ccdc42 11 68587037 to 68597954 10917 + protein coding gene coiled-coil domain containing 42
Tssr102327 11 68594053 to 68594064 11 + TSS region transcription start site region 102327