Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:68469053-68719064

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epfq4 11 12318637 to 68609504 56290867 QTL epididymal fat pad weight QTL 4
Scfq3 11 12318637 to 68609504 56290867 QTL subcutaneous fat pad weight QTL 3
Kidpq1 11 12318637 to 68609504 56290867 QTL kidney weight percentage QTL 1
Lgaq1 11 12318637 to 68609504 56290867 QTL late growth adjusted QTL 1
Lgq1 11 12318637 to 68609504 56290867 QTL late growth QTL 1
W10q2 11 12318637 to 68609504 56290867 QTL weight 10 weeks QTL 2
W3q4 11 12318637 to 68609504 56290867 QTL weight 3 weeks QTL 4
W6q3 11 12318637 to 68609504 56290867 QTL weight 6 weeks QTL 3
Egq4 11 12318637 to 68609504 56290867 QTL early growth QTL 4
Orq2 11 12318637 to 68609504 56290867 QTL ovulation rate QTL 2
Tailq1 11 12318637 to 68609504 56290867 QTL tail length QTL 1
Eae6 11 17831966 to 68609504 50777538 QTL experimental allergic encephalomyelitis susceptibility 6
Ltxs2 11 63151287 to 68609504 5458217 QTL lethal factor toxin susceptibility 2
Pik3r5 11 68432125 to 68497849 65724 + protein coding gene phosphoinositide-3-kinase regulatory subunit 5
Tssr102306 11 68473816 to 68473855 39 + TSS region transcription start site region 102306
Tssr102307 11 68473856 to 68473867 11 + TSS region transcription start site region 102307
Tssr102308 11 68475401 to 68475415 14 + TSS region transcription start site region 102308
Tssr102309 11 68475431 to 68475465 34 + TSS region transcription start site region 102309
Tssr102310 11 68476307 to 68476344 37 + TSS region transcription start site region 102310
Tssr102311 11 68491957 to 68491969 12 + TSS region transcription start site region 102311
Tssr102312 11 68495395 to 68495407 12 + TSS region transcription start site region 102312
Tssr102313 11 68496450 to 68496457 7 + TSS region transcription start site region 102313
Tssr102314 11 68496501 to 68496512 11 + TSS region transcription start site region 102314
Tssr102315 11 68496526 to 68496552 26 + TSS region transcription start site region 102315
Tssr102316 11 68496565 to 68496582 17 + TSS region transcription start site region 102316
Tssr102317 11 68496612 to 68496625 13 + TSS region transcription start site region 102317
Tssr102318 11 68496648 to 68496663 15 + TSS region transcription start site region 102318
Tssr102319 11 68496684 to 68496703 19 + TSS region transcription start site region 102319
Tssr102320 11 68496707 to 68496720 13 + TSS region transcription start site region 102320
D11Mit1000 11 68500726 to 68500869 143 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 1000
Pik3r6 11 68503019 to 68552698 49679 + protein coding gene phosphoinositide-3-kinase regulatory subunit 5
Tssr102321 11 68503069 to 68503076 7 + TSS region transcription start site region 102321
Tssr102322 11 68503081 to 68503113 32 + TSS region transcription start site region 102322
Cpgi3078 11 68531421 to 68531581 160 CpG island CpG island 3078
Tssr102323 11 68534205 to 68534238 33 + TSS region transcription start site region 102323
Tssr102324 11 68539602 to 68539627 25 + TSS region transcription start site region 102324
D11Mit277 11 68551688 to 68551811 123 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 277
Cpgi3079 11 68555915 to 68556541 626 CpG island CpG island 3079
Mfsd6l 11 68556186 to 68558245 2059 + protein coding gene major facilitator superfamily domain containing 6-like
Tssr102325 11 68556309 to 68556319 10 + TSS region transcription start site region 102325
D11Mit28 11 68560360 to 68560508 148 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 28
Gm40036 11 68562235 to 68572414 10179 + lncRNA gene predicted gene, 40036
Ccdc42os 11 68583270 to 68585621 2351 - antisense lncRNA gene coiled-coil domain containing 42, opposite strand
Tssr102326 11 68586986 to 68587030 44 + TSS region transcription start site region 102326
Ccdc42 11 68587037 to 68597954 10917 + protein coding gene coiled-coil domain containing 42
Tssr102327 11 68594053 to 68594064 11 + TSS region transcription start site region 102327
D11Mit4 11 68609257 to 68609504 247 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 4
Tssr102328 11 68614218 to 68614221 3 + TSS region transcription start site region 102328
Tssr102329 11 68623873 to 68623876 3 + TSS region transcription start site region 102329
Cpgi3080 11 68691294 to 68692452 1158 CpG island CpG island 3080
Tssr108586 11 68691726 to 68691754 28 - TSS region transcription start site region 108586
Tssr102330 11 68691906 to 68691911 5 + TSS region transcription start site region 102330
Myh10 11 68691915 to 68816625 124710 + protein coding gene myosin, heavy polypeptide 10, non-muscle
Tssr102331 11 68691926 to 68691944 18 + TSS region transcription start site region 102331
Tssr102332 11 68691946 to 68691979 33 + TSS region transcription start site region 102332
Tssr102333 11 68692070 to 68692086 16 + TSS region transcription start site region 102333
Tssr102334 11 68692090 to 68692095 5 + TSS region transcription start site region 102334
Tssr102335 11 68692097 to 68692126 29 + TSS region transcription start site region 102335
Tssr102336 11 68692131 to 68692138 7 + TSS region transcription start site region 102336
Cpgi3081 11 68692516 to 68693173 657 CpG island CpG island 3081
Tssr102337 11 68704506 to 68704507 1 + TSS region transcription start site region 102337