Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
W3q4 | 11 | 56290867 | QTL | weight 3 weeks QTL 4 | ||
Orq2 | 11 | 56290867 | QTL | ovulation rate QTL 2 | ||
Epfq4 | 11 | 56290867 | QTL | epididymal fat pad weight QTL 4 | ||
W10q2 | 11 | 56290867 | QTL | weight 10 weeks QTL 2 | ||
Kidpq1 | 11 | 56290867 | QTL | kidney weight percentage QTL 1 | ||
Scfq3 | 11 | 56290867 | QTL | subcutaneous fat pad weight QTL 3 | ||
Lgaq1 | 11 | 56290867 | QTL | late growth adjusted QTL 1 | ||
Egq4 | 11 | 56290867 | QTL | early growth QTL 4 | ||
W6q3 | 11 | 56290867 | QTL | weight 6 weeks QTL 3 | ||
Tailq1 | 11 | 56290867 | QTL | tail length QTL 1 | ||
Lgq1 | 11 | 56290867 | QTL | late growth QTL 1 | ||
Eae6 | 11 | 50777538 | QTL | experimental allergic encephalomyelitis susceptibility 6 | ||
Sluc36 | 11 | 10226082 | QTL | susceptibility to lung cancer 36 | ||
Ltxs2 | 11 | 5458217 | QTL | lethal factor toxin susceptibility 2 | ||
Gm32046 | 11 | 1350 | - | lncRNA gene | predicted gene, 32046 | |
Tssr102293 | 11 | 13 | + | TSS region | transcription start site region 102293 | |
Tssr102294 | 11 | 20 | + | TSS region | transcription start site region 102294 | |
Tssr108581 | 11 | 26 | - | TSS region | transcription start site region 108581 | |
Tssr108582 | 11 | 21 | - | TSS region | transcription start site region 108582 | |
Tssr102295 | 11 | 58 | + | TSS region | transcription start site region 102295 | |
Pik3r5 | 11 | 65724 | + | protein coding gene | phosphoinositide-3-kinase regulatory subunit 5 | |
Cpgi3077 | 11 | 667 | CpG island | CpG island 3077 | ||
Tssr102296 | 11 | 5 | + | TSS region | transcription start site region 102296 | |
Tssr102297 | 11 | 20 | + | TSS region | transcription start site region 102297 | |
Tssr102298 | 11 | 37 | + | TSS region | transcription start site region 102298 | |
Tssr108583 | 11 | 6 | - | TSS region | transcription start site region 108583 | |
Tssr102299 | 11 | 20 | + | TSS region | transcription start site region 102299 | |
Tssr102300 | 11 | 44 | + | TSS region | transcription start site region 102300 | |
Tssr108584 | 11 | 6 | - | TSS region | transcription start site region 108584 | |
Tssr102301 | 11 | 18 | + | TSS region | transcription start site region 102301 | |
Tssr102302 | 11 | 13 | + | TSS region | transcription start site region 102302 | |
Tssr102303 | 11 | 28 | + | TSS region | transcription start site region 102303 | |
Tssr102304 | 11 | 4 | + | TSS region | transcription start site region 102304 | |
Tssr108585 | 11 | 12 | - | TSS region | transcription start site region 108585 | |
Tssr102305 | 11 | 41 | + | TSS region | transcription start site region 102305 | |
Tssr102306 | 11 | 39 | + | TSS region | transcription start site region 102306 | |
Tssr102307 | 11 | 11 | + | TSS region | transcription start site region 102307 | |
Tssr102308 | 11 | 14 | + | TSS region | transcription start site region 102308 | |
Tssr102309 | 11 | 34 | + | TSS region | transcription start site region 102309 | |
Tssr102310 | 11 | 37 | + | TSS region | transcription start site region 102310 | |
Tssr102311 | 11 | 12 | + | TSS region | transcription start site region 102311 | |
Tssr102312 | 11 | 12 | + | TSS region | transcription start site region 102312 | |
Tssr102313 | 11 | 7 | + | TSS region | transcription start site region 102313 | |
Tssr102314 | 11 | 11 | + | TSS region | transcription start site region 102314 | |
Tssr102315 | 11 | 26 | + | TSS region | transcription start site region 102315 | |
Tssr102316 | 11 | 17 | + | TSS region | transcription start site region 102316 | |
Tssr102317 | 11 | 13 | + | TSS region | transcription start site region 102317 | |
Tssr102318 | 11 | 15 | + | TSS region | transcription start site region 102318 | |
Tssr102319 | 11 | 19 | + | TSS region | transcription start site region 102319 | |
Tssr102320 | 11 | 13 | + | TSS region | transcription start site region 102320 | |
D11Mit1000 | 11 | 143 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 1000 | ||
Pik3r6 | 11 | 49679 | + | protein coding gene | phosphoinositide-3-kinase regulatory subunit 5 | |
Tssr102321 | 11 | 7 | + | TSS region | transcription start site region 102321 | |
Tssr102322 | 11 | 32 | + | TSS region | transcription start site region 102322 | |
Cpgi3078 | 11 | 160 | CpG island | CpG island 3078 | ||
Tssr102323 | 11 | 33 | + | TSS region | transcription start site region 102323 | |
Tssr102324 | 11 | 25 | + | TSS region | transcription start site region 102324 | |
D11Mit277 | 11 | 123 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 277 | ||
Cpgi3079 | 11 | 626 | CpG island | CpG island 3079 | ||
Mfsd6l | 11 | 2059 | + | protein coding gene | major facilitator superfamily domain containing 6-like | |
Tssr102325 | 11 | 10 | + | TSS region | transcription start site region 102325 | |
D11Mit28 | 11 | 148 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 28 | ||
Gm40036 | 11 | 10179 | + | lncRNA gene | predicted gene, 40036 | |
Ccdc42os | 11 | 2351 | - | antisense lncRNA gene | coiled-coil domain containing 42, opposite strand | |
Tssr102326 | 11 | 44 | + | TSS region | transcription start site region 102326 | |
Ccdc42 | 11 | 10917 | + | protein coding gene | coiled-coil domain containing 42 | |
Tssr102327 | 11 | 11 | + | TSS region | transcription start site region 102327 | |
D11Mit4 | 11 | 247 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 4 | ||
Tssr102328 | 11 | 3 | + | TSS region | transcription start site region 102328 | |
Tssr102329 | 11 | 3 | + | TSS region | transcription start site region 102329 | |
Cpgi3080 | 11 | 1158 | CpG island | CpG island 3080 | ||
Tssr108586 | 11 | 28 | - | TSS region | transcription start site region 108586 | |
Tssr102330 | 11 | 5 | + | TSS region | transcription start site region 102330 | |
Myh10 | 11 | 124710 | + | protein coding gene | myosin, heavy polypeptide 10, non-muscle | |
Tssr102331 | 11 | 18 | + | TSS region | transcription start site region 102331 | |
Tssr102332 | 11 | 33 | + | TSS region | transcription start site region 102332 | |
Tssr102333 | 11 | 16 | + | TSS region | transcription start site region 102333 | |
Tssr102334 | 11 | 5 | + | TSS region | transcription start site region 102334 | |
Tssr102335 | 11 | 29 | + | TSS region | transcription start site region 102335 | |
Tssr102336 | 11 | 7 | + | TSS region | transcription start site region 102336 | |
Cpgi3081 | 11 | 657 | CpG island | CpG island 3081 | ||
Tssr102337 | 11 | 1 | + | TSS region | transcription start site region 102337 | |
Tssr102338 | 11 | 29 | + | TSS region | transcription start site region 102338 | |
Ndel1 | 11 | 31697 | - | protein coding gene | nudE neurodevelopment protein 1 like 1 | |
Tssr108587 | 11 | 3 | - | TSS region | transcription start site region 108587 | |
Tssr108588 | 11 | 2 | - | TSS region | transcription start site region 108588 | |
Tssr108589 | 11 | 7 | - | TSS region | transcription start site region 108589 | |
Cpgi3082 | 11 | 1038 | CpG island | CpG island 3082 | ||
Tssr108590 | 11 | 20 | - | TSS region | transcription start site region 108590 | |
Tssr108591 | 11 | 82 | - | TSS region | transcription start site region 108591 | |
Tssr108592 | 11 | 21 | - | TSS region | transcription start site region 108592 | |
Tssr102339 | 11 | 45 | + | TSS region | transcription start site region 102339 | |
Tssr102340 | 11 | 15 | + | TSS region | transcription start site region 102340 | |
Tssr102341 | 11 | 7 | + | TSS region | transcription start site region 102341 | |
Tssr108593 | 11 | 3 | - | TSS region | transcription start site region 108593 | |
Tssr3535 | 11 | 29 | - | TSS region | transcription start site region 3535 | |
Tssr108594 | 11 | 15 | - | TSS region | transcription start site region 108594 | |
Tssr108595 | 11 | 12 | - | TSS region | transcription start site region 108595 | |
Tssr108596 | 11 | 41 | - | TSS region | transcription start site region 108596 | |
Tssr108597 | 11 | 5 | - | TSS region | transcription start site region 108597 | |
Tssr108598 | 11 | 7 | - | TSS region | transcription start site region 108598 | |
Tssr102342 | 11 | 39 | + | TSS region | transcription start site region 102342 | |
Tssr3536 | 11 | 1 | + | TSS region | transcription start site region 3536 | |
Tssr108599 | 11 | 9 | - | TSS region | transcription start site region 108599 | |
Tssr108600 | 11 | 15 | - | TSS region | transcription start site region 108600 | |
Tssr108601 | 11 | 44 | - | TSS region | transcription start site region 108601 | |
Tssr102343 | 11 | 11 | + | TSS region | transcription start site region 102343 | |
Tssr3537 | 11 | 23 | + | TSS region | transcription start site region 3537 | |
Tssr3538 | 11 | 9 | + | TSS region | transcription start site region 3538 | |
Tssr102344 | 11 | 6 | + | TSS region | transcription start site region 102344 | |
Tssr102345 | 11 | 17 | + | TSS region | transcription start site region 102345 | |
Rnf222 | 11 | 7224 | + | protein coding gene | ring finger protein 222 | |
Tssr102346 | 11 | 10 | + | TSS region | transcription start site region 102346 | |
Tssr102347 | 11 | 11 | + | TSS region | transcription start site region 102347 | |
Cpgi3083 | 11 | 599 | CpG island | CpG island 3083 | ||
Cpgi3084 | 11 | 898 | CpG island | CpG island 3084 | ||
Tssr102348 | 11 | 12 | + | TSS region | transcription start site region 102348 | |
Tssr102349 | 11 | 95 | + | TSS region | transcription start site region 102349 | |
Rpl26 | 11 | 2968 | + | protein coding gene | ribosomal protein L26 | |
Tssr102350 | 11 | 14 | + | TSS region | transcription start site region 102350 | |
Gm22608 | 11 | 102 | + | snRNA gene | predicted gene, 22608 | |
Odf4 | 11 | 5246 | - | protein coding gene | outer dense fiber of sperm tails 4 | |
Tssr108602 | 11 | 40 | - | TSS region | transcription start site region 108602 | |
Tssr108603 | 11 | 11 | - | TSS region | transcription start site region 108603 | |
D11Ertd518e | 11 | 245 | DNA segment | DNA segment, Chr 11, ERATO Doi 518, expressed | ||
Arhgef15 | 11 | 14325 | - | protein coding gene | Rho guanine nucleotide exchange factor (GEF) 15 | |
Cpgi3085 | 11 | 287 | CpG island | CpG island 3085 | ||
Tssr108604 | 11 | 39 | - | TSS region | transcription start site region 108604 | |
Tssr108605 | 11 | 34 | - | TSS region | transcription start site region 108605 | |
Cpgi3086 | 11 | 307 | CpG island | CpG island 3086 | ||
Tssr108606 | 11 | 34 | - | TSS region | transcription start site region 108606 | |
Tssr108607 | 11 | 36 | - | TSS region | transcription start site region 108607 | |
Gm32273 | 11 | 5379 | + | lncRNA gene | predicted gene, 32273 | |
Tssr102351 | 11 | 19 | + | TSS region | transcription start site region 102351 | |
Tssr108608 | 11 | 40 | - | TSS region | transcription start site region 108608 | |
Slc25a35 | 11 | 4909 | + | protein coding gene | solute carrier family 25, member 35 | |
Tssr102352 | 11 | 11 | + | TSS region | transcription start site region 102352 | |
Cpgi3087 | 11 | 642 | CpG island | CpG island 3087 | ||
Tssr102353 | 11 | 68 | + | TSS region | transcription start site region 102353 | |
Tssr102354 | 11 | 7 | + | TSS region | transcription start site region 102354 | |
Rangrf | 11 | 2701 | - | protein coding gene | RAN guanine nucleotide release factor | |
Tssr108609 | 11 | 14 | - | TSS region | transcription start site region 108609 | |
Cpgi3088 | 11 | 728 | CpG island | CpG island 3088 | ||
Tssr108610 | 11 | 21 | - | TSS region | transcription start site region 108610 | |
Tssr108611 | 11 | 18 | - | TSS region | transcription start site region 108611 | |
Tssr108612 | 11 | 24 | - | TSS region | transcription start site region 108612 | |
Gm32384 | 11 | 6564 | - | lncRNA gene | predicted gene, 32384 | |
Pfas | 11 | 22759 | - | protein coding gene | phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) | |
Cpgi3089 | 11 | 370 | CpG island | CpG island 3089 | ||
Mir3062 | 11 | 104 | - | miRNA gene | microRNA 3062 | |
Gm25819 | 11 | 83 | + | snRNA gene | predicted gene, 25819 | |
Cpgi3090 | 11 | 513 | CpG island | CpG island 3090 | ||
Tssr108613 | 11 | 55 | - | TSS region | transcription start site region 108613 | |
Tssr108614 | 11 | 24 | - | TSS region | transcription start site region 108614 | |
Tssr108615 | 11 | 11 | - | TSS region | transcription start site region 108615 | |
Tssr108616 | 11 | 37 | - | TSS region | transcription start site region 108616 | |
Cpgi3091 | 11 | 604 | CpG island | CpG island 3091 | ||
Ctc1 | 11 | 20562 | + | protein coding gene | CTS telomere maintenance complex component 1 | |
Tssr102355 | 11 | 62 | + | TSS region | transcription start site region 102355 | |
Tssr102356 | 11 | 3 | + | TSS region | transcription start site region 102356 | |
Tssr102357 | 11 | 12 | + | TSS region | transcription start site region 102357 | |
Tssr102358 | 11 | 19 | + | TSS region | transcription start site region 102358 | |
Tssr102359 | 11 | 10 | + | TSS region | transcription start site region 102359 | |
Tssr102360 | 11 | 35 | + | TSS region | transcription start site region 102360 | |
Tssr102361 | 11 | 42 | + | TSS region | transcription start site region 102361 | |
Tssr102362 | 11 | 19 | + | TSS region | transcription start site region 102362 | |
Tssr102363 | 11 | 7 | + | TSS region | transcription start site region 102363 | |
n-TIaat5 | 11 | 73 | + | tRNA gene | nuclear encoded tRNA isoleucine 5 (anticodon AAT) | |
Cpgi3092 | 11 | 407 | CpG island | CpG island 3092 | ||
n-TSaga4 | 11 | 81 | + | tRNA gene | nuclear encoded tRNA serine 4 (anticodon AGA) | |
n-TTagt8 | 11 | 73 | + | tRNA gene | nuclear encoded tRNA threonine 8 (anticodon AGT) | |
D11Mit368 | 11 | 118 | DNA segment | DNA Segment, Chr 11, Massachusetts Institute of Technology-368 | ||
nmf65 | 11 | 20037041 | heritable phenotypic marker | neuroscience mutagenesis facility, 65 | ||
Cpgi3093 | 11 | 959 | CpG island | CpG island 3093 | ||
n-TPcgg3 | 11 | 71 | + | tRNA gene | nuclear encoded tRNA proline 3 (anticodon CGG) | |
n-TDgtc9 | 11 | 71 | + | tRNA gene | nuclear encoded tRNA aspartic acid 9 (anticodon GTC) | |
n-TGtcc6 | 11 | 71 | - | tRNA gene | nuclear encoded tRNA glycine 6 (anticodon TCC) | |
Cpgi3094 | 11 | 279 | CpG island | CpG island 3094 | ||
n-TWcca7 | 11 | 71 | + | tRNA gene | nuclear encoded tRNA trytophan 7 (anticodon CCA) | |
Cpgi3095 | 11 | 776 | CpG island | CpG island 3095 | ||
Tssr102364 | 11 | 73 | + | TSS region | transcription start site region 102364 | |
Aurkb | 11 | 6017 | + | protein coding gene | aurora kinase B | |
Tssr102365 | 11 | 7 | + | TSS region | transcription start site region 102365 | |
Tssr102366 | 11 | 11 | + | TSS region | transcription start site region 102366 | |
Tssr102367 | 11 | 20 | + | TSS region | transcription start site region 102367 | |
9330160F10Rik | 11 | 2765 | - | antisense lncRNA gene | RIKEN cDNA 9330160F10 gene | |
Tssr102368 | 11 | 27 | + | TSS region | transcription start site region 102368 | |
Cpgi3096 | 11 | 1765 | CpG island | CpG island 3096 | ||
Tssr108617 | 11 | 19 | - | TSS region | transcription start site region 108617 | |
Tssr108618 | 11 | 47 | - | TSS region | transcription start site region 108618 | |
Tssr102369 | 11 | 37 | + | TSS region | transcription start site region 102369 | |
Tssr102370 | 11 | 59 | + | TSS region | transcription start site region 102370 | |
Borcs6 | 11 | 1801 | + | protein coding gene | BLOC-1 related complex subunit 6 | |
Tssr102371 | 11 | 19 | + | TSS region | transcription start site region 102371 | |
Tssr102372 | 11 | 23 | + | TSS region | transcription start site region 102372 | |
Tssr108619 | 11 | 15 | - | TSS region | transcription start site region 108619 | |
n-TIaat4 | 11 | 73 | - | tRNA gene | nuclear encoded tRNA isoleucine 4 (anticodon AAT) | |
n-TTagt7 | 11 | 73 | - | tRNA gene | nuclear encoded tRNA threonine 7 (anticodon AGT) | |
Cpgi3097 | 11 | 590 | CpG island | CpG island 3097 | ||
n-TSgct3 | 11 | 81 | - | tRNA gene | nuclear encoded tRNA serine 3 (anticodon GCT) |