Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:68281087-68521104

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ntn1 11 68209364 to 68386826 177462 - protein coding gene netrin 1
2810047J09Rik 11 68364034 to 68365700 1666 unclassified gene RIKEN cDNA 2810047J09 gene
Cpgi3075 11 68384542 to 68387615 3073 CpG island CpG island 3075
Tssr108567 11 68386805 to 68386819 14 - TSS region transcription start site region 108567
Tssr108568 11 68386821 to 68386835 14 - TSS region transcription start site region 108568
Tssr108569 11 68386841 to 68386860 19 - TSS region transcription start site region 108569
Tssr108570 11 68386871 to 68386889 18 - TSS region transcription start site region 108570
Tssr108571 11 68386899 to 68386917 18 - TSS region transcription start site region 108571
Tssr108572 11 68386931 to 68386942 11 - TSS region transcription start site region 108572
Tssr108573 11 68386943 to 68386970 27 - TSS region transcription start site region 108573
Tssr108574 11 68386974 to 68387002 28 - TSS region transcription start site region 108574
Tssr108575 11 68387168 to 68387194 26 - TSS region transcription start site region 108575
Gm31954 11 68398479 to 68406574 8095 + lncRNA gene predicted gene, 31954
Cpgi3076 11 68399508 to 68400814 1306 CpG island CpG island 3076
Tssr108576 11 68400466 to 68400482 16 - TSS region transcription start site region 108576
Tssr108577 11 68400782 to 68400808 26 - TSS region transcription start site region 108577
Tssr108578 11 68400812 to 68400836 24 - TSS region transcription start site region 108578
Tssr108579 11 68401057 to 68401076 19 - TSS region transcription start site region 108579
Tssr108580 11 68401087 to 68401104 17 - TSS region transcription start site region 108580
Gm32046 11 68430688 to 68432038 1350 - lncRNA gene predicted gene, 32046
Tssr102293 11 68431903 to 68431916 13 + TSS region transcription start site region 102293
Tssr102294 11 68431927 to 68431947 20 + TSS region transcription start site region 102294
Tssr108581 11 68431979 to 68432005 26 - TSS region transcription start site region 108581
Tssr108582 11 68432011 to 68432032 21 - TSS region transcription start site region 108582
Tssr102295 11 68432112 to 68432170 58 + TSS region transcription start site region 102295
Pik3r5 11 68432125 to 68497849 65724 + protein coding gene phosphoinositide-3-kinase regulatory subunit 5
Cpgi3077 11 68432144 to 68432811 667 CpG island CpG island 3077
Tssr102296 11 68435983 to 68435988 5 + TSS region transcription start site region 102296
Tssr102297 11 68442620 to 68442640 20 + TSS region transcription start site region 102297
Tssr102298 11 68442789 to 68442826 37 + TSS region transcription start site region 102298
Tssr108583 11 68446004 to 68446010 6 - TSS region transcription start site region 108583
Tssr102299 11 68447558 to 68447578 20 + TSS region transcription start site region 102299
Tssr102300 11 68447597 to 68447641 44 + TSS region transcription start site region 102300
Tssr108584 11 68451363 to 68451369 6 - TSS region transcription start site region 108584
Tssr102301 11 68451636 to 68451654 18 + TSS region transcription start site region 102301
Tssr102302 11 68451673 to 68451686 13 + TSS region transcription start site region 102302
Tssr102303 11 68458384 to 68458412 28 + TSS region transcription start site region 102303
Tssr102304 11 68459527 to 68459531 4 + TSS region transcription start site region 102304
Tssr108585 11 68468270 to 68468282 12 - TSS region transcription start site region 108585
Tssr102305 11 68468529 to 68468570 41 + TSS region transcription start site region 102305
Tssr102306 11 68473816 to 68473855 39 + TSS region transcription start site region 102306
Tssr102307 11 68473856 to 68473867 11 + TSS region transcription start site region 102307
Tssr102308 11 68475401 to 68475415 14 + TSS region transcription start site region 102308
Tssr102309 11 68475431 to 68475465 34 + TSS region transcription start site region 102309
Tssr102310 11 68476307 to 68476344 37 + TSS region transcription start site region 102310
Tssr102311 11 68491957 to 68491969 12 + TSS region transcription start site region 102311
Tssr102312 11 68495395 to 68495407 12 + TSS region transcription start site region 102312
Tssr102313 11 68496450 to 68496457 7 + TSS region transcription start site region 102313
Tssr102314 11 68496501 to 68496512 11 + TSS region transcription start site region 102314
Tssr102315 11 68496526 to 68496552 26 + TSS region transcription start site region 102315
Tssr102316 11 68496565 to 68496582 17 + TSS region transcription start site region 102316
Tssr102317 11 68496612 to 68496625 13 + TSS region transcription start site region 102317
Tssr102318 11 68496648 to 68496663 15 + TSS region transcription start site region 102318
Tssr102319 11 68496684 to 68496703 19 + TSS region transcription start site region 102319
Tssr102320 11 68496707 to 68496720 13 + TSS region transcription start site region 102320
D11Mit1000 11 68500726 to 68500869 143 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 1000
Pik3r6 11 68503019 to 68552698 49679 + protein coding gene phosphoinositide-3-kinase regulatory subunit 5
Tssr102321 11 68503069 to 68503076 7 + TSS region transcription start site region 102321
Tssr102322 11 68503081 to 68503113 32 + TSS region transcription start site region 102322