Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:68189364-68406826

29 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Stx8	11	67966411 to 68207148	240737	+	protein coding gene	syntaxin 8
C78197	11	68192193 to 68196153	3960	-	antisense lncRNA gene	expressed sequence C78197
Tssr108562	11	68196075 to 68196081	6	-	TSS region	transcription start site region 108562
Tssr108563	11	68199208 to 68199251	43	-	TSS region	transcription start site region 108563
Ntn1	11	68209364 to 68386826	177462	-	protein coding gene	netrin 1
Cpgi3074	11	68212942 to 68213330	388		CpG island	CpG island 3074
Mir6406	11	68220892 to 68221011	119	+	miRNA gene	microRNA 6406
Gm12305	11	68269558 to 68270879	1321	-	sense intronic lncRNA gene	predicted gene 12305
Tssr108564	11	68270844 to 68270885	41	-	TSS region	transcription start site region 108564
Tssr108565	11	68270953 to 68270961	8	-	TSS region	transcription start site region 108565
Tssr108566	11	68271245 to 68271254	9	-	TSS region	transcription start site region 108566
2810047J09Rik	11	68364034 to 68365700	1666		unclassified gene	RIKEN cDNA 2810047J09 gene
Cpgi3075	11	68384542 to 68387615	3073		CpG island	CpG island 3075
Tssr108567	11	68386805 to 68386819	14	-	TSS region	transcription start site region 108567
Tssr108568	11	68386821 to 68386835	14	-	TSS region	transcription start site region 108568
Tssr108569	11	68386841 to 68386860	19	-	TSS region	transcription start site region 108569
Tssr108570	11	68386871 to 68386889	18	-	TSS region	transcription start site region 108570
Tssr108571	11	68386899 to 68386917	18	-	TSS region	transcription start site region 108571
Tssr108572	11	68386931 to 68386942	11	-	TSS region	transcription start site region 108572
Tssr108573	11	68386943 to 68386970	27	-	TSS region	transcription start site region 108573
Tssr108574	11	68386974 to 68387002	28	-	TSS region	transcription start site region 108574
Tssr108575	11	68387168 to 68387194	26	-	TSS region	transcription start site region 108575
Gm31954	11	68398479 to 68406574	8095	+	lncRNA gene	predicted gene, 31954
Cpgi3076	11	68399508 to 68400814	1306		CpG island	CpG island 3076
Tssr108576	11	68400466 to 68400482	16	-	TSS region	transcription start site region 108576
Tssr108577	11	68400782 to 68400808	26	-	TSS region	transcription start site region 108577
Tssr108578	11	68400812 to 68400836	24	-	TSS region	transcription start site region 108578
Tssr108579	11	68401057 to 68401076	19	-	TSS region	transcription start site region 108579
Tssr108580	11	68401087 to 68401104	17	-	TSS region	transcription start site region 108580