Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:68096075-68296081

15 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Stx8	11	67966411 to 68207148	240737	+	protein coding gene	syntaxin 8
Tssr3533	11	68118004 to 68118006	2	+	TSS region	transcription start site region 3533
Tssr102291	11	68122670 to 68122685	15	+	TSS region	transcription start site region 102291
Tssr102292	11	68153875 to 68153882	7	+	TSS region	transcription start site region 102292
Tssr3534	11	68176865 to 68176874	9	+	TSS region	transcription start site region 3534
C78197	11	68192193 to 68196153	3960	-	antisense lncRNA gene	expressed sequence C78197
Tssr108562	11	68196075 to 68196081	6	-	TSS region	transcription start site region 108562
Tssr108563	11	68199208 to 68199251	43	-	TSS region	transcription start site region 108563
Ntn1	11	68209364 to 68386826	177462	-	protein coding gene	netrin 1
Cpgi3074	11	68212942 to 68213330	388		CpG island	CpG island 3074
Mir6406	11	68220892 to 68221011	119	+	miRNA gene	microRNA 6406
Gm12305	11	68269558 to 68270879	1321	-	sense intronic lncRNA gene	predicted gene 12305
Tssr108564	11	68270844 to 68270885	41	-	TSS region	transcription start site region 108564
Tssr108565	11	68270953 to 68270961	8	-	TSS region	transcription start site region 108565
Tssr108566	11	68271245 to 68271254	9	-	TSS region	transcription start site region 108566