Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:67943004-68293006

Filter by:
30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
9130017K11Rik 11 67921504 to 67947659 26155 + unclassified non-coding RNA gene RIKEN cDNA 9130017K11 gene
Cfap52 11 67924806 to 67965651 40845 - protein coding gene cilia and flagella associated protein 52
Cpgi3072 11 67965434 to 67965679 245 CpG island CpG island 3072
Tssr108559 11 67965606 to 67965630 24 - TSS region transcription start site region 108559
Tssr108560 11 67965631 to 67965663 32 - TSS region transcription start site region 108560
Cpgi3073 11 67966324 to 67966593 269 CpG island CpG island 3073
Stx8 11 67966411 to 68207148 240737 + protein coding gene syntaxin 8
Tssr102288 11 67966442 to 67966497 55 + TSS region transcription start site region 102288
Tssr102289 11 67975531 to 67975537 6 + TSS region transcription start site region 102289
Tssr102290 11 67980492 to 67980496 4 + TSS region transcription start site region 102290
Gm12303 11 68035038 to 68035710 672 - pseudogene predicted gene 12303
Gm26157 11 68053335 to 68053460 125 + rRNA gene predicted gene, 26157
D11Mit27.1 11 68056535 to 68056675 140 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 27.1
D11Mit27 11 68056690 to 68056791 101 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 27
Gm12304 11 68095580 to 68095964 384 - pseudogene predicted gene 12304
Tssr108561 11 68095979 to 68095991 12 - TSS region transcription start site region 108561
Tssr3533 11 68118004 to 68118006 2 + TSS region transcription start site region 3533
Tssr102291 11 68122670 to 68122685 15 + TSS region transcription start site region 102291
Tssr102292 11 68153875 to 68153882 7 + TSS region transcription start site region 102292
Tssr3534 11 68176865 to 68176874 9 + TSS region transcription start site region 3534
C78197 11 68192193 to 68196153 3960 - antisense lncRNA gene expressed sequence C78197
Tssr108562 11 68196075 to 68196081 6 - TSS region transcription start site region 108562
Tssr108563 11 68199208 to 68199251 43 - TSS region transcription start site region 108563
Ntn1 11 68209364 to 68386826 177462 - protein coding gene netrin 1
Cpgi3074 11 68212942 to 68213330 388 CpG island CpG island 3074
Mir6406 11 68220892 to 68221011 119 + miRNA gene microRNA 6406
Gm12305 11 68269558 to 68270879 1321 - sense intronic lncRNA gene predicted gene 12305
Tssr108564 11 68270844 to 68270885 41 - TSS region transcription start site region 108564
Tssr108565 11 68270953 to 68270961 8 - TSS region transcription start site region 108565
Tssr108566 11 68271245 to 68271254 9 - TSS region transcription start site region 108566