Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:67685434-68245679

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gas7 11 67455437 to 67688990 233553 + protein coding gene growth arrest specific 7
Glp2r 11 67663784 to 67771153 107369 - protein coding gene glucagon-like peptide 2 receptor
Tssr102280 11 67686644 to 67686656 12 + TSS region transcription start site region 102280
Tssr102281 11 67687132 to 67687139 7 + TSS region transcription start site region 102281
Cpgi3070 11 67695069 to 67695845 776 CpG island CpG island 3070
Tssr108555 11 67695209 to 67695224 15 - TSS region transcription start site region 108555
Tssr102282 11 67695314 to 67695326 12 + TSS region transcription start site region 102282
Rcvrn 11 67695326 to 67703333 8007 + protein coding gene recoverin
Tssr102283 11 67695334 to 67695376 42 + TSS region transcription start site region 102283
Tssr3532 11 67695401 to 67695406 5 + TSS region transcription start site region 3532
Tssr108556 11 67771115 to 67771134 19 - TSS region transcription start site region 108556
Gsg1l2 11 67774608 to 67789898 15290 + protein coding gene GSG1-like 2
Tssr102284 11 67798250 to 67798259 9 + TSS region transcription start site region 102284
Tssr102285 11 67798269 to 67798286 17 + TSS region transcription start site region 102285
Dhrs7c 11 67798271 to 67816002 17731 + protein coding gene dehydrogenase/reductase (SDR family) member 7C
Tssr102286 11 67798290 to 67798298 8 + TSS region transcription start site region 102286
Gm40032 11 67817882 to 67844519 26637 - lncRNA gene predicted gene, 40032
Usp43 11 67854523 to 67922153 67630 - protein coding gene ubiquitin specific peptidase 43
Cpgi3071 11 67921094 to 67922659 1565 CpG island CpG island 3071
9130017K11Rik 11 67921504 to 67947659 26155 + unclassified non-coding RNA gene RIKEN cDNA 9130017K11 gene
Tssr108557 11 67922136 to 67922158 22 - TSS region transcription start site region 108557
Tssr108558 11 67922160 to 67922188 28 - TSS region transcription start site region 108558
Tssr102287 11 67922370 to 67922387 17 + TSS region transcription start site region 102287
Cfap52 11 67924806 to 67965651 40845 - protein coding gene cilia and flagella associated protein 52
Cpgi3072 11 67965434 to 67965679 245 CpG island CpG island 3072
Tssr108559 11 67965606 to 67965630 24 - TSS region transcription start site region 108559
Tssr108560 11 67965631 to 67965663 32 - TSS region transcription start site region 108560
Cpgi3073 11 67966324 to 67966593 269 CpG island CpG island 3073
Stx8 11 67966411 to 68207148 240737 + protein coding gene syntaxin 8
Tssr102288 11 67966442 to 67966497 55 + TSS region transcription start site region 102288
Tssr102289 11 67975531 to 67975537 6 + TSS region transcription start site region 102289
Tssr102290 11 67980492 to 67980496 4 + TSS region transcription start site region 102290
Gm12303 11 68035038 to 68035710 672 - pseudogene predicted gene 12303
Gm26157 11 68053335 to 68053460 125 + rRNA gene predicted gene, 26157
D11Mit27.1 11 68056535 to 68056675 140 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 27.1
D11Mit27 11 68056690 to 68056791 101 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 27
Gm12304 11 68095580 to 68095964 384 - pseudogene predicted gene 12304
Tssr108561 11 68095979 to 68095991 12 - TSS region transcription start site region 108561
Tssr3533 11 68118004 to 68118006 2 + TSS region transcription start site region 3533
Tssr102291 11 68122670 to 68122685 15 + TSS region transcription start site region 102291
Tssr102292 11 68153875 to 68153882 7 + TSS region transcription start site region 102292
Tssr3534 11 68176865 to 68176874 9 + TSS region transcription start site region 3534
C78197 11 68192193 to 68196153 3960 - antisense lncRNA gene expressed sequence C78197
Tssr108562 11 68196075 to 68196081 6 - TSS region transcription start site region 108562
Tssr108563 11 68199208 to 68199251 43 - TSS region transcription start site region 108563
Ntn1 11 68209364 to 68386826 177462 - protein coding gene netrin 1
Cpgi3074 11 68212942 to 68213330 388 CpG island CpG island 3074
Mir6406 11 68220892 to 68221011 119 + miRNA gene microRNA 6406