Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:67269963-67639980

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Myh8 11 67277124 to 67308634 31510 + protein coding gene myosin, heavy polypeptide 8, skeletal muscle, perinatal
Tssr102221 11 67277168 to 67277183 15 + TSS region transcription start site region 102221
Tssr102222 11 67277206 to 67277223 17 + TSS region transcription start site region 102222
Tssr102223 11 67278826 to 67278850 24 + TSS region transcription start site region 102223
Tssr108546 11 67279031 to 67279048 17 - TSS region transcription start site region 108546
n-TPtgg2 11 67291139 to 67291210 71 + tRNA gene nuclear encoded tRNA proline 2 (anticodon TGG)
Tssr102224 11 67292425 to 67292430 5 + TSS region transcription start site region 102224
Tssr3530 11 67292900 to 67292916 16 + TSS region transcription start site region 3530
Tssr102225 11 67292929 to 67292946 17 + TSS region transcription start site region 102225
Tssr3531 11 67294511 to 67294518 7 + TSS region transcription start site region 3531
Tssr102226 11 67294549 to 67294564 15 + TSS region transcription start site region 102226
Tssr108547 11 67297743 to 67297751 8 - TSS region transcription start site region 108547
Tssr102227 11 67298465 to 67298480 15 + TSS region transcription start site region 102227
Cpgi3068 11 67298471 to 67298730 259 CpG island CpG island 3068
Tssr108548 11 67298496 to 67298533 37 - TSS region transcription start site region 108548
Tssr108549 11 67299322 to 67299360 38 - TSS region transcription start site region 108549
Tssr102228 11 67299327 to 67299365 38 + TSS region transcription start site region 102228
Tssr102229 11 67301716 to 67301728 12 + TSS region transcription start site region 102229
Tssr102230 11 67301767 to 67301779 12 + TSS region transcription start site region 102230
Tssr108550 11 67301994 to 67302039 45 - TSS region transcription start site region 108550
Tssr102231 11 67305679 to 67305707 28 + TSS region transcription start site region 102231
Tssr102232 11 67308569 to 67308596 27 + TSS region transcription start site region 102232
Tssr102233 11 67321638 to 67321648 10 + TSS region transcription start site region 102233
Tssr102234 11 67321778 to 67321783 5 + TSS region transcription start site region 102234
Myh13 11 67327103 to 67371502 44399 + protein coding gene myosin, heavy polypeptide 13, skeletal muscle
Tssr102235 11 67344779 to 67344807 28 + TSS region transcription start site region 102235
Gm40029 11 67348920 to 67350271 1351 - lncRNA gene predicted gene, 40029
Gm26476 11 67364090 to 67364402 312 + unclassified non-coding RNA gene predicted gene, 26476
Tssr108551 11 67379773 to 67379786 13 - TSS region transcription start site region 108551
Tssr102236 11 67384803 to 67384805 2 + TSS region transcription start site region 102236
Gm31459 11 67435740 to 67435922 182 - pseudogene predicted gene, 31459
Cpgi3069 11 67454628 to 67456231 1603 CpG island CpG island 3069
Tssr102237 11 67454963 to 67454980 17 + TSS region transcription start site region 102237
Tssr102238 11 67455068 to 67455156 88 + TSS region transcription start site region 102238
Tssr102239 11 67455339 to 67455403 64 + TSS region transcription start site region 102239
Gas7 11 67455437 to 67688990 233553 + protein coding gene growth arrest specific 7
Tssr102240 11 67479761 to 67479774 13 + TSS region transcription start site region 102240
Tssr102241 11 67492317 to 67492338 21 + TSS region transcription start site region 102241
Tssr108552 11 67500968 to 67501006 38 - TSS region transcription start site region 108552
D11Mit351 11 67517049 to 67517157 108 DNA segment DNA Segment, Chr 11 Massachusetts Institute of Technology 351
Tssr102242 11 67532448 to 67532476 28 + TSS region transcription start site region 102242
Tssr102243 11 67533038 to 67533059 21 + TSS region transcription start site region 102243
Tssr102244 11 67533075 to 67533091 16 + TSS region transcription start site region 102244
Tssr102245 11 67559831 to 67559834 3 + TSS region transcription start site region 102245
Tssr102246 11 67564476 to 67564487 11 + TSS region transcription start site region 102246
Tssr102247 11 67571215 to 67571267 52 + TSS region transcription start site region 102247
Gm12301 11 67571622 to 67577466 5844 - antisense lncRNA gene predicted gene 12301
Tssr108553 11 67581934 to 67581942 8 - TSS region transcription start site region 108553
Tssr102248 11 67586520 to 67586546 26 + TSS region transcription start site region 102248
Tssr102249 11 67586552 to 67586563 11 + TSS region transcription start site region 102249
Tssr102250 11 67586592 to 67586601 9 + TSS region transcription start site region 102250
Tssr102251 11 67586609 to 67586618 9 + TSS region transcription start site region 102251
Tssr102252 11 67586625 to 67586634 9 + TSS region transcription start site region 102252
Tssr102253 11 67586644 to 67586662 18 + TSS region transcription start site region 102253
Tssr102254 11 67586675 to 67586720 45 + TSS region transcription start site region 102254
Tssr102255 11 67586750 to 67586761 11 + TSS region transcription start site region 102255
Tssr108554 11 67589162 to 67589164 2 - TSS region transcription start site region 108554
Tssr102256 11 67596521 to 67596573 52 + TSS region transcription start site region 102256
Tssr102257 11 67596614 to 67596621 7 + TSS region transcription start site region 102257
Tssr102258 11 67596627 to 67596636 9 + TSS region transcription start site region 102258
Tssr102259 11 67613785 to 67613797 12 + TSS region transcription start site region 102259
Tssr102260 11 67617150 to 67617167 17 + TSS region transcription start site region 102260
Tssr102261 11 67617168 to 67617192 24 + TSS region transcription start site region 102261
D11Mit297 11 67624967 to 67625091 124 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 297
D11Mit115 11 67639172 to 67639268 96 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 115