Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:67162789-69722826

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924 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Orq2 11 12318637 to 68609504 56290867 QTL ovulation rate QTL 2
Tailq1 11 12318637 to 68609504 56290867 QTL tail length QTL 1
Kidpq1 11 12318637 to 68609504 56290867 QTL kidney weight percentage QTL 1
W6q3 11 12318637 to 68609504 56290867 QTL weight 6 weeks QTL 3
Lgq1 11 12318637 to 68609504 56290867 QTL late growth QTL 1
Lgaq1 11 12318637 to 68609504 56290867 QTL late growth adjusted QTL 1
Scfq3 11 12318637 to 68609504 56290867 QTL subcutaneous fat pad weight QTL 3
Egq4 11 12318637 to 68609504 56290867 QTL early growth QTL 4
W3q4 11 12318637 to 68609504 56290867 QTL weight 3 weeks QTL 4
Epfq4 11 12318637 to 68609504 56290867 QTL epididymal fat pad weight QTL 4
W10q2 11 12318637 to 68609504 56290867 QTL weight 10 weeks QTL 2
Orgwq8 11 17106175 to 67187585 50081410 QTL organ weight QTL 8
Eae6 11 17831966 to 68609504 50777538 QTL experimental allergic encephalomyelitis susceptibility 6
Blmpf2 11 54174844 to 67187585 13012741 QTL bleomycin-induced pulmonary fibrosis 2
Sluc36 11 59365791 to 69591873 10226082 QTL susceptibility to lung cancer 36
Ltxs2 11 63151287 to 68609504 5458217 QTL lethal factor toxin susceptibility 2
Tssr3524 11 67171011 to 67171040 29 + TSS region transcription start site region 3524
Myh2 11 67171027 to 67197517 26490 + protein coding gene myosin, heavy polypeptide 2, skeletal muscle, adult
Tssr102158 11 67171059 to 67171071 12 + TSS region transcription start site region 102158
Tssr102159 11 67171095 to 67171112 17 + TSS region transcription start site region 102159
Ssta4 11 67187365 to 67187585 220 QTL susceptibility to Salmonella typhimurium antigens 4
Ity2b 11 67187365 to 79923086 12735721 QTL immunity to S. typhimurium 2b
D11Mit5 11 67187365 to 67187585 220 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 5
9430073C21Rik 11 67195680 to 67199234 3554 - antisense lncRNA gene Riken cDNA 9430073C21 gene
Tssr102160 11 67200091 to 67200107 16 + TSS region transcription start site region 102160
Myh1 11 67200109 to 67224575 24466 + protein coding gene myosin, heavy polypeptide 1, skeletal muscle, adult
Tssr102161 11 67200137 to 67200148 11 + TSS region transcription start site region 102161
Tssr102162 11 67201743 to 67201754 11 + TSS region transcription start site region 102162
Tssr108517 11 67215946 to 67215957 11 - TSS region transcription start site region 108517
Tssr102163 11 67219697 to 67219708 11 + TSS region transcription start site region 102163
Myhas 11 67224681 to 67237573 12892 - antisense lncRNA gene myosin heavy chain gene antisense RNA
Tssr102164 11 67236185 to 67236196 11 + TSS region transcription start site region 102164
Tssr102165 11 67236204 to 67236211 7 + TSS region transcription start site region 102165
Tssr108518 11 67237451 to 67237457 6 - TSS region transcription start site region 108518
Tssr108519 11 67237571 to 67237609 38 - TSS region transcription start site region 108519
Tssr102166 11 67237764 to 67237776 12 + TSS region transcription start site region 102166
Tssr102167 11 67237800 to 67237818 18 + TSS region transcription start site region 102167
Tssr102168 11 67237852 to 67237864 12 + TSS region transcription start site region 102168
Tssr102169 11 67238017 to 67238047 30 + TSS region transcription start site region 102169
Myh4 11 67238029 to 67260446 22417 + protein coding gene myosin, heavy polypeptide 4, skeletal muscle
Tssr102170 11 67240557 to 67240605 48 + TSS region transcription start site region 102170
Tssr108520 11 67240774 to 67240794 20 - TSS region transcription start site region 108520
Tssr102171 11 67240911 to 67240946 35 + TSS region transcription start site region 102171
Tssr102172 11 67242809 to 67242818 9 + TSS region transcription start site region 102172
Tssr102173 11 67242826 to 67242837 11 + TSS region transcription start site region 102173
Tssr108521 11 67242834 to 67242837 3 - TSS region transcription start site region 108521
Tssr108522 11 67243042 to 67243087 45 - TSS region transcription start site region 108522
Tssr102174 11 67243223 to 67243226 3 + TSS region transcription start site region 102174
Tssr102175 11 67243259 to 67243289 30 + TSS region transcription start site region 102175
Tssr102176 11 67243423 to 67243444 21 + TSS region transcription start site region 102176
Tssr102177 11 67243449 to 67243463 14 + TSS region transcription start site region 102177
Tssr108523 11 67243457 to 67243466 9 - TSS region transcription start site region 108523
Tssr108524 11 67243473 to 67243493 20 - TSS region transcription start site region 108524
Tssr102178 11 67244637 to 67244649 12 + TSS region transcription start site region 102178
Tssr108525 11 67244703 to 67244726 23 - TSS region transcription start site region 108525
Tssr102179 11 67245431 to 67245468 37 + TSS region transcription start site region 102179
Tssr102180 11 67245769 to 67245783 14 + TSS region transcription start site region 102180
Tssr102181 11 67248561 to 67248567 6 + TSS region transcription start site region 102181
Tssr3525 11 67248577 to 67248588 11 + TSS region transcription start site region 3525
Tssr108526 11 67248651 to 67248674 23 - TSS region transcription start site region 108526
Tssr102182 11 67248682 to 67248693 11 + TSS region transcription start site region 102182
Tssr108527 11 67249253 to 67249272 19 - TSS region transcription start site region 108527
Tssr102183 11 67249257 to 67249266 9 + TSS region transcription start site region 102183
Tssr102184 11 67249825 to 67249833 8 + TSS region transcription start site region 102184
Tssr102185 11 67249855 to 67249866 11 + TSS region transcription start site region 102185
Tssr102186 11 67250004 to 67250013 9 + TSS region transcription start site region 102186
Tssr102187 11 67250039 to 67250051 12 + TSS region transcription start site region 102187
Tssr102188 11 67250313 to 67250338 25 + TSS region transcription start site region 102188
Tssr3526 11 67250363 to 67250377 14 + TSS region transcription start site region 3526
Tssr102189 11 67250506 to 67250526 20 + TSS region transcription start site region 102189
Tssr102190 11 67250533 to 67250542 9 + TSS region transcription start site region 102190
Tssr102191 11 67250544 to 67250563 19 + TSS region transcription start site region 102191
Tssr102192 11 67250564 to 67250569 5 + TSS region transcription start site region 102192
Tssr102193 11 67250605 to 67250612 7 + TSS region transcription start site region 102193
Tssr108528 11 67250629 to 67250644 15 - TSS region transcription start site region 108528
Tssr102194 11 67250747 to 67250754 7 + TSS region transcription start site region 102194
Tssr102195 11 67250827 to 67250837 10 + TSS region transcription start site region 102195
Tssr102196 11 67250865 to 67250876 11 + TSS region transcription start site region 102196
Tssr3527 11 67250873 to 67250877 4 - TSS region transcription start site region 3527
Tssr102197 11 67250893 to 67250920 27 + TSS region transcription start site region 102197
Tssr108529 11 67250937 to 67250958 21 - TSS region transcription start site region 108529
Tssr108530 11 67250959 to 67250960 1 - TSS region transcription start site region 108530
Tssr108531 11 67250962 to 67250988 26 - TSS region transcription start site region 108531
Tssr102198 11 67250971 to 67250981 10 + TSS region transcription start site region 102198
Tssr102199 11 67251699 to 67251735 36 + TSS region transcription start site region 102199
Tssr108532 11 67251736 to 67251758 22 - TSS region transcription start site region 108532
Tssr102200 11 67251850 to 67251886 36 + TSS region transcription start site region 102200
Tssr108533 11 67251897 to 67251910 13 - TSS region transcription start site region 108533
Tssr108534 11 67252596 to 67252604 8 - TSS region transcription start site region 108534
Tssr108535 11 67252692 to 67252710 18 - TSS region transcription start site region 108535
Tssr102201 11 67253475 to 67253518 43 + TSS region transcription start site region 102201
Tssr102202 11 67253997 to 67254007 10 + TSS region transcription start site region 102202
Tssr108536 11 67254044 to 67254054 10 - TSS region transcription start site region 108536
Tssr108537 11 67254056 to 67254075 19 - TSS region transcription start site region 108537
Tssr102203 11 67254057 to 67254070 13 + TSS region transcription start site region 102203
Tssr102204 11 67254455 to 67254466 11 + TSS region transcription start site region 102204
Tssr108538 11 67254558 to 67254585 27 - TSS region transcription start site region 108538
Tssr102205 11 67254673 to 67254683 10 + TSS region transcription start site region 102205
Tssr3528 11 67254733 to 67254743 10 + TSS region transcription start site region 3528
Tssr108539 11 67254766 to 67254783 17 - TSS region transcription start site region 108539
Tssr102206 11 67254777 to 67254787 10 + TSS region transcription start site region 102206
Tssr3529 11 67254789 to 67254799 10 + TSS region transcription start site region 3529
Tssr108540 11 67254826 to 67254841 15 - TSS region transcription start site region 108540
Tssr102207 11 67255421 to 67255440 19 + TSS region transcription start site region 102207
Tssr108541 11 67255435 to 67255483 48 - TSS region transcription start site region 108541
Tssr102208 11 67255591 to 67255603 12 + TSS region transcription start site region 102208
Tssr108542 11 67255596 to 67255619 23 - TSS region transcription start site region 108542
Tssr102209 11 67255626 to 67255642 16 + TSS region transcription start site region 102209
Tssr102210 11 67255644 to 67255653 9 + TSS region transcription start site region 102210
Tssr102211 11 67255654 to 67255670 16 + TSS region transcription start site region 102211
Tssr102212 11 67255676 to 67255688 12 + TSS region transcription start site region 102212
Tssr108543 11 67255711 to 67255730 19 - TSS region transcription start site region 108543
Tssr102213 11 67255828 to 67255840 12 + TSS region transcription start site region 102213
Tssr102214 11 67256184 to 67256191 7 + TSS region transcription start site region 102214
Tssr102215 11 67256198 to 67256215 17 + TSS region transcription start site region 102215
Tssr102216 11 67256242 to 67256251 9 + TSS region transcription start site region 102216
Tssr108544 11 67256294 to 67256315 21 - TSS region transcription start site region 108544
Tssr102217 11 67256396 to 67256405 9 + TSS region transcription start site region 102217
Tssr102218 11 67257107 to 67257116 9 + TSS region transcription start site region 102218
Tssr102219 11 67257194 to 67257211 17 + TSS region transcription start site region 102219
Tssr108545 11 67257226 to 67257252 26 - TSS region transcription start site region 108545
Tssr102220 11 67257233 to 67257249 16 + TSS region transcription start site region 102220
Cpgi3067 11 67258999 to 67259186 187 CpG island CpG island 3067
Myh8 11 67277124 to 67308634 31510 + protein coding gene myosin, heavy polypeptide 8, skeletal muscle, perinatal
Tssr102221 11 67277168 to 67277183 15 + TSS region transcription start site region 102221
Tssr102222 11 67277206 to 67277223 17 + TSS region transcription start site region 102222
Tssr102223 11 67278826 to 67278850 24 + TSS region transcription start site region 102223
Tssr108546 11 67279031 to 67279048 17 - TSS region transcription start site region 108546
n-TPtgg2 11 67291139 to 67291210 71 + tRNA gene nuclear encoded tRNA proline 2 (anticodon TGG)
Tssr102224 11 67292425 to 67292430 5 + TSS region transcription start site region 102224
Tssr3530 11 67292900 to 67292916 16 + TSS region transcription start site region 3530
Tssr102225 11 67292929 to 67292946 17 + TSS region transcription start site region 102225
Tssr3531 11 67294511 to 67294518 7 + TSS region transcription start site region 3531
Tssr102226 11 67294549 to 67294564 15 + TSS region transcription start site region 102226
Tssr108547 11 67297743 to 67297751 8 - TSS region transcription start site region 108547
Tssr102227 11 67298465 to 67298480 15 + TSS region transcription start site region 102227
Cpgi3068 11 67298471 to 67298730 259 CpG island CpG island 3068
Tssr108548 11 67298496 to 67298533 37 - TSS region transcription start site region 108548
Tssr108549 11 67299322 to 67299360 38 - TSS region transcription start site region 108549
Tssr102228 11 67299327 to 67299365 38 + TSS region transcription start site region 102228
Tssr102229 11 67301716 to 67301728 12 + TSS region transcription start site region 102229
Tssr102230 11 67301767 to 67301779 12 + TSS region transcription start site region 102230
Tssr108550 11 67301994 to 67302039 45 - TSS region transcription start site region 108550
Tssr102231 11 67305679 to 67305707 28 + TSS region transcription start site region 102231
Tssr102232 11 67308569 to 67308596 27 + TSS region transcription start site region 102232
Tssr102233 11 67321638 to 67321648 10 + TSS region transcription start site region 102233
Tssr102234 11 67321778 to 67321783 5 + TSS region transcription start site region 102234
Myh13 11 67327103 to 67371502 44399 + protein coding gene myosin, heavy polypeptide 13, skeletal muscle
Tssr102235 11 67344779 to 67344807 28 + TSS region transcription start site region 102235
Gm40029 11 67348920 to 67350271 1351 - lncRNA gene predicted gene, 40029
Gm26476 11 67364090 to 67364402 312 + unclassified non-coding RNA gene predicted gene, 26476
Tssr108551 11 67379773 to 67379786 13 - TSS region transcription start site region 108551
Tssr102236 11 67384803 to 67384805 2 + TSS region transcription start site region 102236
Gm31459 11 67435740 to 67435922 182 - pseudogene predicted gene, 31459
Cpgi3069 11 67454628 to 67456231 1603 CpG island CpG island 3069
Tssr102237 11 67454963 to 67454980 17 + TSS region transcription start site region 102237
Tssr102238 11 67455068 to 67455156 88 + TSS region transcription start site region 102238
Tssr102239 11 67455339 to 67455403 64 + TSS region transcription start site region 102239
Gas7 11 67455437 to 67688990 233553 + protein coding gene growth arrest specific 7
Tssr102240 11 67479761 to 67479774 13 + TSS region transcription start site region 102240
Tssr102241 11 67492317 to 67492338 21 + TSS region transcription start site region 102241
Tssr108552 11 67500968 to 67501006 38 - TSS region transcription start site region 108552
D11Mit351 11 67517049 to 67517157 108 DNA segment DNA Segment, Chr 11 Massachusetts Institute of Technology 351
Tssr102242 11 67532448 to 67532476 28 + TSS region transcription start site region 102242
Tssr102243 11 67533038 to 67533059 21 + TSS region transcription start site region 102243
Tssr102244 11 67533075 to 67533091 16 + TSS region transcription start site region 102244
Tssr102245 11 67559831 to 67559834 3 + TSS region transcription start site region 102245
Tssr102246 11 67564476 to 67564487 11 + TSS region transcription start site region 102246
Tssr102247 11 67571215 to 67571267 52 + TSS region transcription start site region 102247
Gm12301 11 67571622 to 67577466 5844 - antisense lncRNA gene predicted gene 12301
Tssr108553 11 67581934 to 67581942 8 - TSS region transcription start site region 108553
Tssr102248 11 67586520 to 67586546 26 + TSS region transcription start site region 102248
Tssr102249 11 67586552 to 67586563 11 + TSS region transcription start site region 102249
Tssr102250 11 67586592 to 67586601 9 + TSS region transcription start site region 102250
Tssr102251 11 67586609 to 67586618 9 + TSS region transcription start site region 102251
Tssr102252 11 67586625 to 67586634 9 + TSS region transcription start site region 102252
Tssr102253 11 67586644 to 67586662 18 + TSS region transcription start site region 102253
Tssr102254 11 67586675 to 67586720 45 + TSS region transcription start site region 102254
Tssr102255 11 67586750 to 67586761 11 + TSS region transcription start site region 102255
Tssr108554 11 67589162 to 67589164 2 - TSS region transcription start site region 108554
Tssr102256 11 67596521 to 67596573 52 + TSS region transcription start site region 102256
Tssr102257 11 67596614 to 67596621 7 + TSS region transcription start site region 102257
Tssr102258 11 67596627 to 67596636 9 + TSS region transcription start site region 102258
Tssr102259 11 67613785 to 67613797 12 + TSS region transcription start site region 102259
Tssr102260 11 67617150 to 67617167 17 + TSS region transcription start site region 102260
Tssr102261 11 67617168 to 67617192 24 + TSS region transcription start site region 102261
D11Mit297 11 67624967 to 67625091 124 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 297
D11Mit115 11 67639172 to 67639268 96 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 115
Tssr102262 11 67643297 to 67643317 20 + TSS region transcription start site region 102262
Tssr102263 11 67646594 to 67646607 13 + TSS region transcription start site region 102263
Tssr102264 11 67652479 to 67652495 16 + TSS region transcription start site region 102264
Tssr102265 11 67652548 to 67652563 15 + TSS region transcription start site region 102265
Tssr102266 11 67652574 to 67652594 20 + TSS region transcription start site region 102266
Tssr102267 11 67652598 to 67652637 39 + TSS region transcription start site region 102267
Tssr102268 11 67652642 to 67652653 11 + TSS region transcription start site region 102268
Tssr102269 11 67652717 to 67652766 49 + TSS region transcription start site region 102269
Tssr102270 11 67652835 to 67652858 23 + TSS region transcription start site region 102270
Tssr102271 11 67656045 to 67656065 20 + TSS region transcription start site region 102271
Glp2r 11 67663784 to 67771153 107369 - protein coding gene glucagon-like peptide 2 receptor
Tssr102272 11 67682155 to 67682165 10 + TSS region transcription start site region 102272