Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:67053119-67173288

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sco1 11 67052670 to 67067070 14400 + protein coding gene SCO1 cytochrome c oxidase assembly protein
Tssr102153 11 67064750 to 67064771 21 + TSS region transcription start site region 102153
Tssr102154 11 67078293 to 67078307 14 + TSS region transcription start site region 102154
Myh3 11 67078300 to 67102291 23991 + protein coding gene myosin, heavy polypeptide 3, skeletal muscle, embryonic
Cpgi3063 11 67083740 to 67084263 523 CpG island CpG island 3063
Tssr3523 11 67090360 to 67090370 10 + TSS region transcription start site region 3523
Tssr102155 11 67092073 to 67092088 15 + TSS region transcription start site region 102155
Cpgi3064 11 67094473 to 67094925 452 CpG island CpG island 3064
Tssr102156 11 67097894 to 67097948 54 + TSS region transcription start site region 102156
Tssr102157 11 67098568 to 67098581 13 + TSS region transcription start site region 102157
Mir6923 11 67099804 to 67099875 71 + miRNA gene microRNA 6923
Cpgi3065 11 67107275 to 67107470 195 CpG island CpG island 3065
2310065F04Rik 11 67112461 to 67120080 7619 - lincRNA gene RIKEN cDNA 2310065F04 gene
Cpgi3066 11 67113119 to 67113288 169 CpG island CpG island 3066
Tssr108508 11 67113438 to 67113474 36 - TSS region transcription start site region 108508
Tssr108509 11 67114788 to 67114793 5 - TSS region transcription start site region 108509
Tssr108510 11 67114826 to 67114831 5 - TSS region transcription start site region 108510
Tssr108511 11 67114882 to 67114889 7 - TSS region transcription start site region 108511
Tssr108512 11 67114908 to 67114927 19 - TSS region transcription start site region 108512
Tssr108513 11 67114940 to 67114952 12 - TSS region transcription start site region 108513
Tssr108514 11 67116818 to 67116826 8 - TSS region transcription start site region 108514
Tssr108515 11 67116831 to 67116845 14 - TSS region transcription start site region 108515
D11Mit89 11 67126005 to 67126153 148 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 89
Gm31285 11 67134937 to 67143944 9007 - lncRNA gene predicted gene, 31285
Tssr108516 11 67140970 to 67140994 24 - TSS region transcription start site region 108516
Tssr3524 11 67171011 to 67171040 29 + TSS region transcription start site region 3524
Myh2 11 67171027 to 67197517 26490 + protein coding gene myosin, heavy polypeptide 2, skeletal muscle, adult
Tssr102158 11 67171059 to 67171071 12 + TSS region transcription start site region 102158
Tssr102159 11 67171095 to 67171112 17 + TSS region transcription start site region 102159