Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:66167785-66936312

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dnah9 11 65831282 to 66168551 337269 - protein coding gene dynein, axonemal, heavy chain 9
Cpgi3058 11 66167914 to 66168617 703 CpG island CpG island 3058
Tssr102131 11 66168006 to 66168022 16 + TSS region transcription start site region 102131
Gm12296 11 66168035 to 66301237 133202 + lncRNA gene predicted gene 12296
Tssr108495 11 66168467 to 66168480 13 - TSS region transcription start site region 108495
Tssr108496 11 66168505 to 66168518 13 - TSS region transcription start site region 108496
Gm45917 11 66168522 to 66426709 258187 + lncRNA gene predicted gene, 45917
Shisa6 11 66211725 to 66525964 314239 - protein coding gene shisa family member 6
Cpgi3059 11 66217468 to 66217892 424 CpG island CpG island 3059
Gm45945 11 66248645 to 66279197 30552 + lncRNA gene predicted gene, 45945
Tssr102132 11 66319753 to 66319756 3 + TSS region transcription start site region 102132
D11Mit193 11 66337519 to 66337653 134 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 193
Tssr108497 11 66339589 to 66339593 4 - TSS region transcription start site region 108497
Tssr102133 11 66380391 to 66380394 3 + TSS region transcription start site region 102133
Cpgi3060 11 66525114 to 66527255 2141 CpG island CpG island 3060
Tssr108498 11 66526571 to 66526582 11 - TSS region transcription start site region 108498
Tssr108499 11 66526617 to 66526628 11 - TSS region transcription start site region 108499
Tssr108500 11 66526635 to 66526703 68 - TSS region transcription start site region 108500
Tssr108501 11 66526710 to 66526734 24 - TSS region transcription start site region 108501
Tssr108502 11 66526986 to 66527018 32 - TSS region transcription start site region 108502
Gm40028 11 66547785 to 66556312 8527 + lncRNA gene predicted gene, 40028
D11Mit113 11 66550163 to 66550307 144 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 113
Tssr3521 11 66563535 to 66563540 5 + TSS region transcription start site region 3521
Gm12297 11 66563607 to 66564585 978 + pseudogene predicted gene 12297
Gm12298 11 66905721 to 66947086 41365 - antisense lncRNA gene predicted gene 12298
Gm29712 11 66907552 to 66908454 902 + pseudogene predicted gene, 29712
D11Mit209 11 66909174 to 66909268 94 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 209
Pirt 11 66911981 to 66929876 17895 + protein coding gene phosphoinositide-interacting regulator of transient receptor potential channels
Tssr102134 11 66911983 to 66912003 20 + TSS region transcription start site region 102134
Tssr102135 11 66912004 to 66912044 40 + TSS region transcription start site region 102135
Tssr102136 11 66912052 to 66912071 19 + TSS region transcription start site region 102136