Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:6612273-6662302

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbrg4 11 6615598 to 6626067 10469 - protein coding gene transforming growth factor beta regulated gene 4
Gm24313 11 6619808 to 6619940 132 - snoRNA gene predicted gene, 24313
Snora5c 11 6620319 to 6620419 100 - snoRNA gene small nucleolar RNA, H/ACA box 5C
Tssr106746 11 6623980 to 6623991 11 - TSS region transcription start site region 106746
Tssr106747 11 6624230 to 6624263 33 - TSS region transcription start site region 106747
Cpgi2565 11 6625645 to 6626540 895 CpG island CpG island 2565
Tssr106748 11 6625785 to 6625796 11 - TSS region transcription start site region 106748
Tssr106749 11 6625805 to 6625822 17 - TSS region transcription start site region 106749
Tssr106750 11 6626030 to 6626072 42 - TSS region transcription start site region 106750
Tssr100278 11 6626120 to 6626191 71 + TSS region transcription start site region 100278
D030016M11Rik 11 6626134 to 6627497 1363 unclassified gene RIKEN cDNA D030016M11 gene
Wap 11 6635482 to 6638637 3155 - protein coding gene whey acidic protein
Tssr106751 11 6635536 to 6635541 5 - TSS region transcription start site region 106751
Tssr106752 11 6635545 to 6635555 10 - TSS region transcription start site region 106752
Tssr106753 11 6635568 to 6635572 4 - TSS region transcription start site region 106753
Tssr106754 11 6635578 to 6635583 5 - TSS region transcription start site region 106754
Tssr100279 11 6635601 to 6635609 8 + TSS region transcription start site region 100279
Tssr100280 11 6636705 to 6636721 16 + TSS region transcription start site region 100280
Tssr100281 11 6637231 to 6637250 19 + TSS region transcription start site region 100281
Tssr106755 11 6637245 to 6637260 15 - TSS region transcription start site region 106755
Tssr106756 11 6637273 to 6637302 29 - TSS region transcription start site region 106756
Tssr106757 11 6638571 to 6638585 14 - TSS region transcription start site region 106757
Tssr106758 11 6638640 to 6638655 15 - TSS region transcription start site region 106758
Tssr106759 11 6638791 to 6638797 6 - TSS region transcription start site region 106759
Gm11978 11 6650148 to 6660233 10085 - pseudogene predicted gene 11978
Cpgi2566 11 6658318 to 6658570 252 CpG island CpG island 2566
Tssr100282 11 6658510 to 6658574 64 + TSS region transcription start site region 100282
Ramp3 11 6658533 to 6677478 18945 + protein coding gene receptor (calcitonin) activity modifying protein 3
Tssr106760 11 6660209 to 6660223 14 - TSS region transcription start site region 106760
Tssr106761 11 6660231 to 6660240 9 - TSS region transcription start site region 106761
Tssr106762 11 6660259 to 6660270 11 - TSS region transcription start site region 106762