MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:65830488-66440489

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Dnah9	11	65831282 to 66168551	337269	-	protein coding gene	dynein, axonemal, heavy chain 9
Tssr108493	11	66061306 to 66061315	9	-	TSS region	transcription start site region 108493
Tssr102130	11	66135488 to 66135489	1	+	TSS region	transcription start site region 102130
Gm40027	11	66145481 to 66160077	14596	+	lncRNA gene	predicted gene, 40027
Tssr108494	11	66149316 to 66149321	5	-	TSS region	transcription start site region 108494
Cpgi3058	11	66167914 to 66168617	703		CpG island	CpG island 3058
Tssr102131	11	66168006 to 66168022	16	+	TSS region	transcription start site region 102131
Gm12296	11	66168035 to 66301237	133202	+	lncRNA gene	predicted gene 12296
Tssr108495	11	66168467 to 66168480	13	-	TSS region	transcription start site region 108495
Tssr108496	11	66168505 to 66168518	13	-	TSS region	transcription start site region 108496
Gm45917	11	66168522 to 66426709	258187	+	lncRNA gene	predicted gene, 45917
Shisa6	11	66211725 to 66525964	314239	-	protein coding gene	shisa family member 6
Cpgi3059	11	66217468 to 66217892	424		CpG island	CpG island 3059
Gm45945	11	66248645 to 66279197	30552	+	lncRNA gene	predicted gene, 45945
Tssr102132	11	66319753 to 66319756	3	+	TSS region	transcription start site region 102132
D11Mit193	11	66337519 to 66337653	134		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 193
Tssr108497	11	66339589 to 66339593	4	-	TSS region	transcription start site region 108497
Tssr102133	11	66380391 to 66380394	3	+	TSS region	transcription start site region 102133