MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:65658322-65918341

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm30786	11	65642412 to 65660361	17949	-	lncRNA gene	predicted gene, 30786
Gm40026	11	65650458 to 65682492	32034	+	lncRNA gene	predicted gene, 40026
Tssr102128	11	65667762 to 65667764	2	+	TSS region	transcription start site region 102128
Map2k4	11	65688243 to 65788297	100054	-	protein coding gene	mitogen-activated protein kinase kinase 4
Tssr108485	11	65728020 to 65728024	4	-	TSS region	transcription start site region 108485
Mir744	11	65734733 to 65734832	99	-	miRNA gene	microRNA 744
Tssr108486	11	65745827 to 65745844	17	-	TSS region	transcription start site region 108486
Tssr108487	11	65745852 to 65745880	28	-	TSS region	transcription start site region 108487
Cpgi3056	11	65787404 to 65788639	1235		CpG island	CpG island 3056
Tssr108488	11	65788247 to 65788260	13	-	TSS region	transcription start site region 108488
Tssr108489	11	65788275 to 65788318	43	-	TSS region	transcription start site region 108489
Tssr108490	11	65788322 to 65788341	19	-	TSS region	transcription start site region 108490
Tssr108491	11	65806541 to 65806585	44	-	TSS region	transcription start site region 108491
Cpgi3057	11	65806555 to 65807652	1097		CpG island	CpG island 3057
Tssr108492	11	65807019 to 65807034	15	-	TSS region	transcription start site region 108492
Zkscan6	11	65807175 to 65829239	22064	+	protein coding gene	zinc finger with KRAB and SCAN domains 6
Tssr102129	11	65807210 to 65807227	17	+	TSS region	transcription start site region 102129
Dnah9	11	65831282 to 66168551	337269	-	protein coding gene	dynein, axonemal, heavy chain 9