Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:6486548-6540960

24 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm11973	11	6475425 to 6493535	18110	+	antisense lncRNA gene	predicted gene 11973
Myo1g	11	6506548 to 6520960	14412	-	protein coding gene	myosin IG
Tssr106724	11	6519168 to 6519180	12	-	TSS region	transcription start site region 106724
Tssr106725	11	6519497 to 6519513	16	-	TSS region	transcription start site region 106725
Tssr106726	11	6519769 to 6519789	20	-	TSS region	transcription start site region 106726
Tssr106727	11	6519800 to 6519828	28	-	TSS region	transcription start site region 106727
Tssr106728	11	6520844 to 6520851	7	-	TSS region	transcription start site region 106728
Tssr106729	11	6520864 to 6520866	2	-	TSS region	transcription start site region 106729
Tssr106730	11	6520872 to 6520891	19	-	TSS region	transcription start site region 106730
Tssr106731	11	6520894 to 6520969	75	-	TSS region	transcription start site region 106731
Tssr100263	11	6521010 to 6521024	14	+	TSS region	transcription start site region 100263
Tssr100264	11	6521038 to 6521048	10	+	TSS region	transcription start site region 100264
Tssr106732	11	6522782 to 6522786	4	-	TSS region	transcription start site region 106732
Tssr106733	11	6522848 to 6522854	6	-	TSS region	transcription start site region 106733
Snhg15	11	6525591 to 6528760	3169	-	lncRNA gene	small nucleolar RNA host gene 15
Snora9	11	6528033 to 6528165	132	-	snoRNA gene	small nucleolar RNA, H/ACA box 9
Cpgi2561	11	6528277 to 6529061	784		CpG island	CpG island 2561
Tssr106734	11	6528394 to 6528403	9	-	TSS region	transcription start site region 106734
Tssr106735	11	6528420 to 6528433	13	-	TSS region	transcription start site region 106735
Tssr106736	11	6528441 to 6528462	21	-	TSS region	transcription start site region 106736
Tssr106737	11	6528496 to 6528521	25	-	TSS region	transcription start site region 106737
Tssr106738	11	6528707 to 6528780	73	-	TSS region	transcription start site region 106738
Tssr106739	11	6528782 to 6528807	25	-	TSS region	transcription start site region 106739
Tssr100265	11	6528902 to 6528915	13	+	TSS region	transcription start site region 100265