Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:64699025-65259110

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ckdbp2 11 54190115 to 65213015 11022900 QTL chronic kidney disease blood pressure locus 2
Gm30305 11 64662793 to 64719258 56465 - lncRNA gene predicted gene, 30305
Tssr102121 11 64741594 to 64741600 6 + TSS region transcription start site region 102121
Gm12291 11 64759717 to 64760027 310 - pseudogene predicted gene 12291
Tssr108458 11 64774640 to 64774644 4 - TSS region transcription start site region 108458
Tssr102122 11 64800740 to 64800757 17 + TSS region transcription start site region 102122
Gm12292 11 64840600 to 64843753 3153 - lincRNA gene predicted gene 12292
Gm40025 11 64842114 to 64843917 1803 + lncRNA gene predicted gene, 40025
Cpgi3051 11 64978739 to 64979497 758 CpG island CpG island 3051
Tssr102123 11 64979025 to 64979110 85 + TSS region transcription start site region 102123
Elac2 11 64979038 to 65002069 23031 + protein coding gene elaC ribonuclease Z 2
Tssr102124 11 64979121 to 64979136 15 + TSS region transcription start site region 102124
Cpgi3052 11 65001789 to 65002013 224 CpG island CpG island 3052
Arhgap44 11 65002039 to 65162961 160922 - protein coding gene Rho GTPase activating protein 44
Tssr108459 11 65003078 to 65003082 4 - TSS region transcription start site region 108459
Tssr3518 11 65009943 to 65009974 31 - TSS region transcription start site region 3518
Tssr108460 11 65031723 to 65031730 7 - TSS region transcription start site region 108460
Tssr3519 11 65032231 to 65032237 6 + TSS region transcription start site region 3519
Tssr108461 11 65032402 to 65032413 11 - TSS region transcription start site region 108461
Tssr108462 11 65032432 to 65032447 15 - TSS region transcription start site region 108462
Gm12294 11 65037052 to 65037541 489 - pseudogene predicted gene 12294
Gm25991 11 65067709 to 65067807 98 - miRNA gene predicted gene, 25991
Tssr3520 11 65096403 to 65096406 3 + TSS region transcription start site region 3520
C030044O21Rik 11 65145187 to 65147937 2750 unclassified gene RIKEN cDNA C030044O21 gene
1700086D15Rik 11 65152617 to 65158343 5726 - protein coding gene RIKEN cDNA 1700086D15 gene
Tssr102125 11 65159957 to 65159984 27 + TSS region transcription start site region 102125
Cpgi3053 11 65162085 to 65163122 1037 CpG island CpG island 3053
B430202K04Rik 11 65162131 to 65164065 1934 protein coding gene RIKEN cDNA B430202K04 gene
Tssr108463 11 65162907 to 65162976 69 - TSS region transcription start site region 108463
Gm12293 11 65169844 to 65170364 520 - pseudogene predicted gene 12293
Tssr108464 11 65174384 to 65174391 7 - TSS region transcription start site region 108464
Myocd 11 65176561 to 65269989 93428 - protein coding gene myocardin
Tssr108465 11 65178089 to 65178096 7 - TSS region transcription start site region 108465
Cpgi3054 11 65187419 to 65187665 246 CpG island CpG island 3054
D11Mit177 11 65212885 to 65213015 130 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 177
Tssr108466 11 65221796 to 65221821 25 - TSS region transcription start site region 108466
Tssr108467 11 65243549 to 65243562 13 - TSS region transcription start site region 108467
Tssr108468 11 65243570 to 65243603 33 - TSS region transcription start site region 108468
Tssr108469 11 65243636 to 65243651 15 - TSS region transcription start site region 108469
Tssr108470 11 65243656 to 65243668 12 - TSS region transcription start site region 108470