Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:6339074-6456158

34 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ogdh	11	6291633 to 6356642	65009	+	protein coding gene	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
Tssr100238	11	6346533 to 6346558	25	+	TSS region	transcription start site region 100238
Tssr100239	11	6366140 to 6366153	13	+	TSS region	transcription start site region 100239
Tssr100240	11	6366236 to 6366244	8	+	TSS region	transcription start site region 100240
Tssr106714	11	6367111 to 6367161	50	-	TSS region	transcription start site region 106714
Cpgi2557	11	6388811 to 6390072	1261		CpG island	CpG island 2557
Tssr100241	11	6389061 to 6389080	19	+	TSS region	transcription start site region 100241
Zmiz2	11	6389074 to 6406158	17084	+	protein coding gene	zinc finger, MIZ-type containing 2
Tssr100242	11	6389085 to 6389106	21	+	TSS region	transcription start site region 100242
Tssr100243	11	6389117 to 6389137	20	+	TSS region	transcription start site region 100243
Tssr100244	11	6389330 to 6389397	67	+	TSS region	transcription start site region 100244
Tssr100245	11	6389428 to 6389435	7	+	TSS region	transcription start site region 100245
Tssr100246	11	6389442 to 6389453	11	+	TSS region	transcription start site region 100246
Tssr100247	11	6389553 to 6389573	20	+	TSS region	transcription start site region 100247
Tssr100248	11	6389576 to 6389596	20	+	TSS region	transcription start site region 100248
Mir7651	11	6401630 to 6401693	63	+	miRNA gene	microRNA 7651
Tssr100249	11	6403868 to 6403881	13	+	TSS region	transcription start site region 100249
Cpgi2558	11	6415302 to 6416788	1486		CpG island	CpG island 2558
Tssr106715	11	6415649 to 6415691	42	-	TSS region	transcription start site region 106715
Tssr100250	11	6415774 to 6415783	9	+	TSS region	transcription start site region 100250
Tssr100251	11	6415803 to 6415813	10	+	TSS region	transcription start site region 100251
Tssr100252	11	6415830 to 6415867	37	+	TSS region	transcription start site region 100252
Ppia	11	6415870 to 6419810	3940	+	protein coding gene	peptidylprolyl isomerase A
Tssr100253	11	6416227 to 6416232	5	+	TSS region	transcription start site region 100253
Tssr100254	11	6416258 to 6416317	59	+	TSS region	transcription start site region 100254
Tssr100255	11	6416329 to 6416345	16	+	TSS region	transcription start site region 100255
H2afv	11	6427229 to 6444443	17214	-	protein coding gene	H2A histone family, member V
Cpgi2559	11	6443931 to 6444793	862		CpG island	CpG island 2559
Tssr106716	11	6444359 to 6444370	11	-	TSS region	transcription start site region 106716
Tssr106717	11	6444384 to 6444439	55	-	TSS region	transcription start site region 106717
Tssr100256	11	6446174 to 6446195	21	+	TSS region	transcription start site region 100256
Gm11970	11	6446218 to 6446537	319	+	pseudogene	predicted gene 11970
Gm11971	11	6453151 to 6453438	287	+	pseudogene	predicted gene 11971
Gm11972	11	6455517 to 6455905	388	-	pseudogene	predicted gene 11972