Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:63185408-63835519

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spqq1 11 54174844 to 63428696 9253852 QTL sperm quality QTL 1
B430319H21Rik 11 63173914 to 63188454 14540 + lincRNA gene RIKEN cDNA B430319H21 gene
Cpgi3039 11 63213898 to 63214056 158 CpG island CpG island 3039
Gm12285 11 63241248 to 63241445 197 - pseudogene predicted gene 12285
Gm29851 11 63247297 to 63250153 2856 - lncRNA gene predicted gene, 29851
Tssr108444 11 63271011 to 63271020 9 - TSS region transcription start site region 108444
Tssr102107 11 63271400 to 63271411 11 + TSS region transcription start site region 102107
D11Mit350 11 63294341 to 63294436 95 DNA segment DNA Segment, Chr 11 Massachusetts Institute of Technology 350
Bbaa4 11 63294341 to 63294436 95 QTL B.burgdorferi-associated arthritis 4
Gm12286 11 63312310 to 63313311 1001 - pseudogene predicted gene 12286
Tssr108445 11 63313381 to 63313384 3 - TSS region transcription start site region 108445
B130011K05Rik 11 63413169 to 63417888 4719 + lincRNA gene RIKEN cDNA B130011K05 gene
Bmd11 11 63428581 to 63428696 115 QTL bone mineral density 11
D11Mit242 11 63428581 to 63428696 115 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 242
Lmr15 11 63428581 to 81939647 18511066 QTL leishmaniasis resistance 15
Stzid3 11 63428581 to 94173092 30744511 QTL streptozotocin induced diabetes susceptibility 3
Gm40016 11 63448969 to 63464157 15188 - lncRNA gene predicted gene, 40016
Cpgi3040 11 63463826 to 63464018 192 CpG island CpG island 3040
Tssr108446 11 63463921 to 63463932 11 - TSS region transcription start site region 108446
Tssr108447 11 63463955 to 63463974 19 - TSS region transcription start site region 108447
Tssr108448 11 63464079 to 63464114 35 - TSS region transcription start site region 108448
D11Mit156 11 63510408 to 63510519 111 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 156
Gm12287 11 63599632 to 63600923 1291 - pseudogene predicted gene 12287
Gm40019 11 63612829 to 63615792 2963 - lncRNA gene predicted gene, 40019
Gm29958 11 63619192 to 63644391 25199 + protein coding gene predicted gene, 29958
Gm12288 11 63817019 to 63818300 1281 - pseudogene predicted gene 12288