Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:6311630-6491693

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ogdh 11 6291633 to 6356642 65009 + protein coding gene oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
Tssr100236 11 6320595 to 6320599 4 + TSS region transcription start site region 100236
Tssr100237 11 6334448 to 6334452 4 + TSS region transcription start site region 100237
Tssr100238 11 6346533 to 6346558 25 + TSS region transcription start site region 100238
Tssr100239 11 6366140 to 6366153 13 + TSS region transcription start site region 100239
Tssr100240 11 6366236 to 6366244 8 + TSS region transcription start site region 100240
Tssr106714 11 6367111 to 6367161 50 - TSS region transcription start site region 106714
Cpgi2557 11 6388811 to 6390072 1261 CpG island CpG island 2557
Tssr100241 11 6389061 to 6389080 19 + TSS region transcription start site region 100241
Zmiz2 11 6389074 to 6406158 17084 + protein coding gene zinc finger, MIZ-type containing 2
Tssr100242 11 6389085 to 6389106 21 + TSS region transcription start site region 100242
Tssr100243 11 6389117 to 6389137 20 + TSS region transcription start site region 100243
Tssr100244 11 6389330 to 6389397 67 + TSS region transcription start site region 100244
Tssr100245 11 6389428 to 6389435 7 + TSS region transcription start site region 100245
Tssr100246 11 6389442 to 6389453 11 + TSS region transcription start site region 100246
Tssr100247 11 6389553 to 6389573 20 + TSS region transcription start site region 100247
Tssr100248 11 6389576 to 6389596 20 + TSS region transcription start site region 100248
Mir7651 11 6401630 to 6401693 63 + miRNA gene microRNA 7651
Tssr100249 11 6403868 to 6403881 13 + TSS region transcription start site region 100249
Cpgi2558 11 6415302 to 6416788 1486 CpG island CpG island 2558
Tssr106715 11 6415649 to 6415691 42 - TSS region transcription start site region 106715
Tssr100250 11 6415774 to 6415783 9 + TSS region transcription start site region 100250
Tssr100251 11 6415803 to 6415813 10 + TSS region transcription start site region 100251
Tssr100252 11 6415830 to 6415867 37 + TSS region transcription start site region 100252
Ppia 11 6415870 to 6419810 3940 + protein coding gene peptidylprolyl isomerase A
Tssr100253 11 6416227 to 6416232 5 + TSS region transcription start site region 100253
Tssr100254 11 6416258 to 6416317 59 + TSS region transcription start site region 100254
Tssr100255 11 6416329 to 6416345 16 + TSS region transcription start site region 100255
H2afv 11 6427229 to 6444443 17214 - protein coding gene H2A histone family, member V
Cpgi2559 11 6443931 to 6444793 862 CpG island CpG island 2559
Tssr106716 11 6444359 to 6444370 11 - TSS region transcription start site region 106716
Tssr106717 11 6444384 to 6444439 55 - TSS region transcription start site region 106717
Tssr100256 11 6446174 to 6446195 21 + TSS region transcription start site region 100256
Gm11970 11 6446218 to 6446537 319 + pseudogene predicted gene 11970
Gm11971 11 6453151 to 6453438 287 + pseudogene predicted gene 11971
Gm11972 11 6455517 to 6455905 388 - pseudogene predicted gene 11972
Purb 11 6467599 to 6475917 8318 - protein coding gene purine rich element binding protein B
Tssr106718 11 6469968 to 6469991 23 - TSS region transcription start site region 106718
Tssr106719 11 6471473 to 6471493 20 - TSS region transcription start site region 106719
Gm22123 11 6472225 to 6472277 52 - miRNA gene predicted gene, 22123
Tssr106720 11 6472232 to 6472239 7 - TSS region transcription start site region 106720
Cpgi2560 11 6474629 to 6476457 1828 CpG island CpG island 2560
Tssr100257 11 6474693 to 6474751 58 + TSS region transcription start site region 100257
Tssr100258 11 6474906 to 6474946 40 + TSS region transcription start site region 100258
Tssr100259 11 6474962 to 6475025 63 + TSS region transcription start site region 100259
Tssr100260 11 6475102 to 6475116 14 + TSS region transcription start site region 100260
Tssr100261 11 6475266 to 6475307 41 + TSS region transcription start site region 100261
Gm11973 11 6475425 to 6493535 18110 + antisense lncRNA gene predicted gene 11973
Tssr106721 11 6475450 to 6475470 20 - TSS region transcription start site region 106721
Tssr106722 11 6475881 to 6475917 36 - TSS region transcription start site region 106722
Tssr106723 11 6475992 to 6476102 110 - TSS region transcription start site region 106723
Tssr100262 11 6476161 to 6476175 14 + TSS region transcription start site region 100262