Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:62553086-62653148

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ubb 11 62551171 to 62553213 2042 + protein coding gene ubiquitin B
Tssr102036 11 62554674 to 62554679 5 + TSS region transcription start site region 102036
Cpgi3025 11 62560453 to 62561016 563 CpG island CpG island 3025
Tssr102037 11 62560491 to 62560496 5 + TSS region transcription start site region 102037
Gm12280 11 62564477 to 62566383 1906 - antisense lncRNA gene predicted gene 12280
Tssr108432 11 62574082 to 62574085 3 - TSS region transcription start site region 108432
Tssr102038 11 62574477 to 62574522 45 + TSS region transcription start site region 102038
Trpv2 11 62574486 to 62600305 25819 + protein coding gene transient receptor potential cation channel, subfamily V, member 2
Tssr102039 11 62574523 to 62574552 29 + TSS region transcription start site region 102039
Tssr102040 11 62574573 to 62574584 11 + TSS region transcription start site region 102040
Tssr102041 11 62575618 to 62575642 24 + TSS region transcription start site region 102041
Cpgi3026 11 62575825 to 62576231 406 CpG island CpG island 3026
Tssr102042 11 62575877 to 62575890 13 + TSS region transcription start site region 102042
Tssr102043 11 62575897 to 62575933 36 + TSS region transcription start site region 102043
Tssr102044 11 62575935 to 62575964 29 + TSS region transcription start site region 102044
Tssr102045 11 62575981 to 62575992 11 + TSS region transcription start site region 102045
Tssr102046 11 62576025 to 62576032 7 + TSS region transcription start site region 102046
Tssr102047 11 62583898 to 62583921 23 + TSS region transcription start site region 102047
Cpgi3027 11 62602482 to 62603503 1021 CpG island CpG island 3027
Tssr102048 11 62602867 to 62602886 19 + TSS region transcription start site region 102048
2410006H16Rik 11 62602877 to 62604806 1929 + lncRNA gene RIKEN cDNA 2410006H16 gene
Tssr102049 11 62602957 to 62602991 34 + TSS region transcription start site region 102049
Tssr102050 11 62603061 to 62603078 17 + TSS region transcription start site region 102050
Snord49b 11 62603086 to 62603148 62 + snoRNA gene small nucleolar RNA, C/D box 49B
Tssr102051 11 62603115 to 62603166 51 + TSS region transcription start site region 102051
Tssr102052 11 62603181 to 62603192 11 + TSS region transcription start site region 102052
Tssr102053 11 62603447 to 62603457 10 + TSS region transcription start site region 102053
Snord49a 11 62603460 to 62603521 61 + snoRNA gene small nucleolar RNA, C/D box 49A
Snord65 11 62604530 to 62604586 56 + snoRNA gene small nucleolar RNA, C/D box 65
Lrrc75a 11 62604884 to 62648523 43639 - protein coding gene leucine rich repeat containing 75A
Tssr102054 11 62605728 to 62605778 50 + TSS region transcription start site region 102054
Lrrc75aos2 11 62605766 to 62607748 1982 + antisense lncRNA gene leucine rich repeat containing 75A, opposite strand 2
Tssr108433 11 62617134 to 62617138 4 - TSS region transcription start site region 108433
Lrrc75aos1 11 62634704 to 62638788 4084 + antisense lncRNA gene leucine rich repeat containing 75A, opposite strand 1
Cpgi3028 11 62647743 to 62649143 1400 CpG island CpG island 3028
Tssr108434 11 62648034 to 62648050 16 - TSS region transcription start site region 108434
Tssr3517 11 62648155 to 62648188 33 + TSS region transcription start site region 3517
Tssr108435 11 62648458 to 62648514 56 - TSS region transcription start site region 108435
Tssr108436 11 62648563 to 62648591 28 - TSS region transcription start site region 108436
Tssr102055 11 62648656 to 62648685 29 + TSS region transcription start site region 102055
Mmgt2 11 62648664 to 62666354 17690 + protein coding gene membrane magnesium transporter 2
Tssr102056 11 62648686 to 62648700 14 + TSS region transcription start site region 102056
Tssr102057 11 62648766 to 62648781 15 + TSS region transcription start site region 102057
Tssr102058 11 62648782 to 62648790 8 + TSS region transcription start site region 102058
Tssr102059 11 62648811 to 62648828 17 + TSS region transcription start site region 102059
Tssr102060 11 62648830 to 62648839 9 + TSS region transcription start site region 102060
Tssr102061 11 62650487 to 62650502 15 + TSS region transcription start site region 102061