Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:62208245-62478293

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Specc1 11 61956763 to 62223013 266250 + protein coding gene sperm antigen with calponin homology and coiled-coil domains 1
Cpgi3020 11 62248339 to 62249600 1261 CpG island CpG island 3020
Tssr101999 11 62248977 to 62249011 34 + TSS region transcription start site region 101999
Adora2b 11 62248984 to 62266452 17468 + protein coding gene adenosine A2b receptor
Tssr102000 11 62249012 to 62249027 15 + TSS region transcription start site region 102000
Tssr102001 11 62249062 to 62249073 11 + TSS region transcription start site region 102001
Zswim7 11 62267224 to 62281375 14151 - protein coding gene zinc finger SWIM-type containing 7
Cpgi3021 11 62281031 to 62282039 1008 CpG island CpG island 3021
Tssr108391 11 62281342 to 62281419 77 - TSS region transcription start site region 108391
Tssr102002 11 62281424 to 62281434 10 + TSS region transcription start site region 102002
Tssr102003 11 62281440 to 62281456 16 + TSS region transcription start site region 102003
Tssr102004 11 62281457 to 62281495 38 + TSS region transcription start site region 102004
Ttc19 11 62281459 to 62316441 34982 + protein coding gene tetratricopeptide repeat domain 19
Tssr102005 11 62281503 to 62281521 18 + TSS region transcription start site region 102005
Gm12275 11 62304864 to 62305170 306 - pseudogene predicted gene 12275
Ncor1 11 62316426 to 62458541 142115 - protein coding gene nuclear receptor co-repressor 1
Gm12276 11 62331421 to 62331721 300 + pseudogene predicted gene 12276
Tssr108392 11 62343245 to 62343293 48 - TSS region transcription start site region 108392
Tssr108393 11 62344846 to 62344887 41 - TSS region transcription start site region 108393
Tssr108394 11 62389764 to 62389800 36 - TSS region transcription start site region 108394
Tssr108395 11 62391013 to 62391042 29 - TSS region transcription start site region 108395
Tssr108396 11 62392578 to 62392595 17 - TSS region transcription start site region 108396
Tssr108397 11 62392605 to 62392618 13 - TSS region transcription start site region 108397
Tssr108398 11 62395196 to 62395218 22 - TSS region transcription start site region 108398
Tssr108399 11 62410899 to 62410926 27 - TSS region transcription start site region 108399
Tssr108400 11 62416316 to 62416321 5 - TSS region transcription start site region 108400
Tssr108401 11 62433641 to 62433654 13 - TSS region transcription start site region 108401
Tssr108402 11 62456523 to 62456527 4 - TSS region transcription start site region 108402
Tssr102006 11 62456597 to 62456614 17 + TSS region transcription start site region 102006
Cpgi3022 11 62456621 to 62458774 2153 CpG island CpG island 3022
Tssr102007 11 62456644 to 62456662 18 + TSS region transcription start site region 102007
Tssr108403 11 62457289 to 62457332 43 - TSS region transcription start site region 108403
Tssr102008 11 62457411 to 62457449 38 + TSS region transcription start site region 102008
Tssr102009 11 62457469 to 62457484 15 + TSS region transcription start site region 102009
Tssr108404 11 62457557 to 62457571 14 - TSS region transcription start site region 108404
Tssr108405 11 62457574 to 62457594 20 - TSS region transcription start site region 108405
Tssr108406 11 62457772 to 62457835 63 - TSS region transcription start site region 108406
Tssr108407 11 62457853 to 62457867 14 - TSS region transcription start site region 108407
Tssr108408 11 62457917 to 62457930 13 - TSS region transcription start site region 108408
Tssr108409 11 62457935 to 62457946 11 - TSS region transcription start site region 108409
Tssr108410 11 62458352 to 62458390 38 - TSS region transcription start site region 108410
Tssr102010 11 62458414 to 62458469 55 + TSS region transcription start site region 102010
Pigl 11 62458460 to 62513900 55440 + protein coding gene phosphatidylinositol glycan anchor biosynthesis, class L
Tssr108411 11 62458508 to 62458548 40 - TSS region transcription start site region 108411
Tssr102011 11 62458582 to 62458600 18 + TSS region transcription start site region 102011
Tssr102012 11 62458616 to 62458629 13 + TSS region transcription start site region 102012
Tssr108412 11 62458698 to 62458719 21 - TSS region transcription start site region 108412
Tssr108413 11 62463331 to 62463341 10 - TSS region transcription start site region 108413
Tssr108414 11 62463355 to 62463368 13 - TSS region transcription start site region 108414
Tssr108415 11 62466479 to 62466498 19 - TSS region transcription start site region 108415
Tssr108416 11 62466568 to 62466570 2 - TSS region transcription start site region 108416