Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:62104062-62394073

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Specc1 11 61956763 to 62223013 266250 + protein coding gene sperm antigen with calponin homology and coiled-coil domains 1
Tssr101997 11 62107537 to 62107542 5 + TSS region transcription start site region 101997
Gm39985 11 62129563 to 62132303 2740 - lncRNA gene predicted gene, 39985
Tssr101998 11 62131084 to 62131088 4 + TSS region transcription start site region 101998
D11Mit261 11 62151201 to 62151308 107 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 261
Tssr108389 11 62185064 to 62185067 3 - TSS region transcription start site region 108389
Tssr108390 11 62205165 to 62205176 11 - TSS region transcription start site region 108390
D11Mit318 11 62206383 to 62206483 100 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 318
Cpgi3020 11 62248339 to 62249600 1261 CpG island CpG island 3020
Tssr101999 11 62248977 to 62249011 34 + TSS region transcription start site region 101999
Adora2b 11 62248984 to 62266452 17468 + protein coding gene adenosine A2b receptor
Tssr102000 11 62249012 to 62249027 15 + TSS region transcription start site region 102000
Tssr102001 11 62249062 to 62249073 11 + TSS region transcription start site region 102001
Zswim7 11 62267224 to 62281375 14151 - protein coding gene zinc finger SWIM-type containing 7
Cpgi3021 11 62281031 to 62282039 1008 CpG island CpG island 3021
Tssr108391 11 62281342 to 62281419 77 - TSS region transcription start site region 108391
Tssr102002 11 62281424 to 62281434 10 + TSS region transcription start site region 102002
Tssr102003 11 62281440 to 62281456 16 + TSS region transcription start site region 102003
Tssr102004 11 62281457 to 62281495 38 + TSS region transcription start site region 102004
Ttc19 11 62281459 to 62316441 34982 + protein coding gene tetratricopeptide repeat domain 19
Tssr102005 11 62281503 to 62281521 18 + TSS region transcription start site region 102005
Gm12275 11 62304864 to 62305170 306 - pseudogene predicted gene 12275
Ncor1 11 62316426 to 62458541 142115 - protein coding gene nuclear receptor co-repressor 1
Gm12276 11 62331421 to 62331721 300 + pseudogene predicted gene 12276
Tssr108392 11 62343245 to 62343293 48 - TSS region transcription start site region 108392
Tssr108393 11 62344846 to 62344887 41 - TSS region transcription start site region 108393
Tssr108394 11 62389764 to 62389800 36 - TSS region transcription start site region 108394
Tssr108395 11 62391013 to 62391042 29 - TSS region transcription start site region 108395
Tssr108396 11 62392578 to 62392595 17 - TSS region transcription start site region 108396
Tssr108397 11 62392605 to 62392618 13 - TSS region transcription start site region 108397