MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:62036201-62266308

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Specc1	11	61956763 to 62223013	266250	+	protein coding gene	sperm antigen with calponin homology and coiled-coil domains 1
Gm39988	11	62038464 to 62054431	15967	-	lncRNA gene	predicted gene, 39988
Tssr101995	11	62057234 to 62057238	4	+	TSS region	transcription start site region 101995
Cpgi3019	11	62076644 to 62077716	1072		CpG island	CpG island 3019
Tssr101996	11	62077018 to 62077101	83	+	TSS region	transcription start site region 101996
Tssr101997	11	62107537 to 62107542	5	+	TSS region	transcription start site region 101997
Gm39985	11	62129563 to 62132303	2740	-	lncRNA gene	predicted gene, 39985
Tssr101998	11	62131084 to 62131088	4	+	TSS region	transcription start site region 101998
D11Mit261	11	62151201 to 62151308	107		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 261
Tssr108389	11	62185064 to 62185067	3	-	TSS region	transcription start site region 108389
Tssr108390	11	62205165 to 62205176	11	-	TSS region	transcription start site region 108390
D11Mit318	11	62206383 to 62206483	100		DNA segment	DNA Segment, Chr 11, Massachusetts Institute of Technology 318
Cpgi3020	11	62248339 to 62249600	1261		CpG island	CpG island 3020
Tssr101999	11	62248977 to 62249011	34	+	TSS region	transcription start site region 101999
Adora2b	11	62248984 to 62266452	17468	+	protein coding gene	adenosine A2b receptor
Tssr102000	11	62249012 to 62249027	15	+	TSS region	transcription start site region 102000
Tssr102001	11	62249062 to 62249073	11	+	TSS region	transcription start site region 102001