Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:61601775-61922292

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
2210019G11Rik 11 61617837 to 61619146 1309 unclassified gene RIKEN cDNA 2210019G11 gene
Tssr101969 11 61617865 to 61617881 16 + TSS region transcription start site region 101969
Cpgi3013 11 61620392 to 61620691 299 CpG island CpG island 3013
Tssr108368 11 61647235 to 61647243 8 - TSS region transcription start site region 108368
Tssr101970 11 61647703 to 61647724 21 + TSS region transcription start site region 101970
Tssr101971 11 61651134 to 61651161 27 + TSS region transcription start site region 101971
Tssr108369 11 61653123 to 61653138 15 - TSS region transcription start site region 108369
Tssr101972 11 61653224 to 61653235 11 + TSS region transcription start site region 101972
Tssr101973 11 61653244 to 61653253 9 + TSS region transcription start site region 101973
Tssr101974 11 61653259 to 61653353 94 + TSS region transcription start site region 101974
Grap 11 61653321 to 61672777 19456 + protein coding gene GRB2-related adaptor protein
Tssr101975 11 61653358 to 61653370 12 + TSS region transcription start site region 101975
Tssr101976 11 61656329 to 61656333 4 + TSS region transcription start site region 101976
Tssr101977 11 61661046 to 61661050 4 + TSS region transcription start site region 101977
Tssr101978 11 61669028 to 61669033 5 + TSS region transcription start site region 101978
Tssr101979 11 61672195 to 61672218 23 + TSS region transcription start site region 101979
Slc5a10 11 61672782 to 61720816 48034 - protein coding gene solute carrier family 5 (sodium/glucose cotransporter), member 10
Cpgi3014 11 61683827 to 61685177 1350 CpG island CpG island 3014
Tssr101980 11 61684078 to 61684096 18 + TSS region transcription start site region 101980
Fam83g 11 61684091 to 61709951 25860 + protein coding gene family with sequence similarity 83, member G
Tssr101981 11 61684424 to 61684454 30 + TSS region transcription start site region 101981
Tssr101982 11 61684456 to 61684471 15 + TSS region transcription start site region 101982
Tssr108370 11 61719978 to 61719998 20 - TSS region transcription start site region 108370
Tssr108371 11 61720087 to 61720125 38 - TSS region transcription start site region 108371
Tssr108372 11 61720795 to 61720803 8 - TSS region transcription start site region 108372
Tssr108373 11 61720812 to 61720831 19 - TSS region transcription start site region 108373
Prpsap2 11 61729650 to 61762088 32438 - protein coding gene phosphoribosyl pyrophosphate synthetase-associated protein 2
Tssr108374 11 61761583 to 61761590 7 - TSS region transcription start site region 108374
Cpgi3015 11 61761775 to 61762292 517 CpG island CpG island 3015
Tssr108375 11 61762040 to 61762082 42 - TSS region transcription start site region 108375
Ulk2 11 61775649 to 61855073 79424 - protein coding gene unc-51 like kinase 2
Pid3 11 61795994 to 88808902 27012908 QTL prion incubation determinant 3
D11Mit260 11 61795994 to 61796088 94 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 260
Tssr108376 11 61808646 to 61808650 4 - TSS region transcription start site region 108376
Cpgi3016 11 61854047 to 61855542 1495 CpG island CpG island 3016
Tssr108377 11 61854873 to 61854884 11 - TSS region transcription start site region 108377
Tssr108378 11 61855018 to 61855025 7 - TSS region transcription start site region 108378
Tssr108379 11 61855026 to 61855069 43 - TSS region transcription start site region 108379
Tssr108380 11 61855082 to 61855097 15 - TSS region transcription start site region 108380
Tssr101983 11 61855130 to 61855141 11 + TSS region transcription start site region 101983
Tssr108381 11 61855301 to 61855339 38 - TSS region transcription start site region 108381
A530017D24Rik 11 61864568 to 61868058 3490 - lincRNA gene RIKEN cDNA A530017D24 gene
Gm26964 11 61865475 to 61867639 2164 + lincRNA gene predicted gene, 26964
Akap10 11 61871307 to 61930252 58945 - protein coding gene A kinase (PRKA) anchor protein 10
Tssr108382 11 61878658 to 61878664 6 - TSS region transcription start site region 108382
A430106A12Rik 11 61878735 to 61881451 2716 unclassified non-coding RNA gene RIKEN cDNA A430106A12 gene
Tssr108383 11 61891647 to 61891663 16 - TSS region transcription start site region 108383
Tssr108384 11 61915172 to 61915173 1 - TSS region transcription start site region 108384
Tssr108385 11 61915193 to 61915208 15 - TSS region transcription start site region 108385