Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:61404688-61454806

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13 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(11Cops3-Rnf112)1Jrl 11 59817795 to 61454131 1636336 complex/cluster/region deletion, Chr 11, James R Lupski 1
Dp(11Cops3-Rnf112)1Jrl 11 59817795 to 61454131 1636336 chromosomal duplication duplication, Chr 11, James R Lupski 1
Cpgi3009 11 61407620 to 61408839 1219 CpG island CpG island 3009
n-TWcca5 11 61407916 to 61407987 71 - tRNA gene nuclear encoded tRNA trytophan 5 (anticodon CCA)
Gm45605 11 61408018 to 61412286 4268 + lincRNA gene predicted gene 45605
Gm12271 11 61416402 to 61416815 413 - pseudogene predicted gene 12271
D11Mit317 11 61429688 to 61429806 118 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 317
Rnf112 11 61448442 to 61454131 5689 - protein coding gene ring finger protein 112
Tssr108351 11 61453516 to 61453553 37 - TSS region transcription start site region 108351
Tssr108352 11 61453857 to 61453866 9 - TSS region transcription start site region 108352
Tssr108353 11 61453890 to 61453910 20 - TSS region transcription start site region 108353
Tssr108354 11 61453921 to 61453982 61 - TSS region transcription start site region 108354
Tssr108355 11 61453992 to 61454019 27 - TSS region transcription start site region 108355